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2
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1
reply
5.8k
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Meaning of stat values in DESeq2 result
DESeq2
updated 21 months ago by 45k • written 2.3 years ago by ▴ 30
0
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0
replies
551
views
WGS trimming end of the reads for specific bp before alignment and call somatic variants
read trim WGS somatic variant
2.7 years ago by woongjaej ▴ 30
0
votes
0
replies
963
views
Comment: Comment: Curious about way to start scRNA-seq analysis and machine learning using gene ex
3.0 years ago by woongjaej ▴ 30
1
vote
2
replies
963
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Curious about way to start scRNA-seq analysis and machine learning using gene expression data
learning python cell single RNA-seq R machine
3.0 years ago by woongjaej ▴ 30
0
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0
replies
2.8k
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Comment: Comment: mapping rate of small rna-seq with different references
3.0 years ago by woongjaej ▴ 30
0
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0
replies
571
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How can I understand aggregate in FAN-C tool using Hi-C data?
Hi-C TAD FAN-C aggregate fanc
3.0 years ago by woongjaej ▴ 30
1
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1
reply
2.5k
views
How to analysis 4c seq 3c seq data
3c seq 4c seq alignment
updated 4.2 years ago by ▴ 350 • written 7.3 years ago by ▴ 30
0
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0
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2.9k
views
Comment: C: What does DESeq2 non symmetric MA plot mean in differential analysis?? (hi-chip)
4.5 years ago by woongjaej ▴ 30
3
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5
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2.9k
views
What does DESeq2 non symmetric MA plot mean in differential analysis?? (hi-chip)
Hi-ChIP DESeq2 MA plot differential analysis
updated 4.5 years ago by 88k • written 4.5 years ago by ▴ 30
0
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0
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2.9k
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Comment: C: What does DESeq2 non symmetric MA plot mean in differential analysis?? (hi-chip)
4.5 years ago by woongjaej ▴ 30
1
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2
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2.8k
views
mapping rate of small rna-seq with different references
smRNA-seq mapping rate reference
3.0 years ago by woongjaej ▴ 30
0
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0
replies
6.1k
views
Comment: C: DESeq2 DEG analysis using different sequencing depth data
6.7 years ago by woongjaej ▴ 30
4
votes
10
replies
6.1k
views
DESeq2 DEG analysis using different sequencing depth data
deseq2 RNA-Seq sequencing depth DEG
updated 6.8 years ago by 35k • written 6.8 years ago by ▴ 30
0
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0
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6.1k
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Comment: C: DESeq2 DEG analysis using different sequencing depth data
6.8 years ago by woongjaej ▴ 30
0
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1
reply
6.1k
views
Comment: C: DESeq2 DEG analysis using different sequencing depth data
6.8 years ago by woongjaej ▴ 30
0
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0
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6.1k
views
Comment: C: DESeq2 DEG analysis using different sequencing depth data
6.8 years ago by woongjaej ▴ 30
0
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0
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6.1k
views
Comment: C: DESeq2 DEG analysis using different sequencing depth data
6.8 years ago by woongjaej ▴ 30
0
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0
replies
1.4k
views
qualimap transcript coverage profile truncated in smRNA-seq( ENCODE PIPELINE)
qaulimap2 smRNA-seq STAR
7.0 years ago by woongjaej ▴ 30
0
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0
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1.2k
views
Comment: C: sequencing of control sample in ChIP-seq??
7.1 years ago by woongjaej ▴ 30
1
vote
2
replies
1.2k
views
sequencing of control sample in ChIP-seq??
ChIP-Seq sequencing
updated 7.1 years ago by 105k • written 7.1 years ago by ▴ 30
0
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0
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3.3k
views
Comment: C: Are merged bam files and merge fastq file -> bam files same?
7.4 years ago by woongjaej ▴ 30
0
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1
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3.3k
views
Comment: C: Are merged bam files and merge fastq file -> bam files same?
7.4 years ago by woongjaej ▴ 30
0
votes
6
replies
3.3k
views
Are merged bam files and merge fastq file -> bam files same?
sequencing bam merge
updated 7.4 years ago by 105k • written 7.4 years ago by ▴ 30
0
votes
2
replies
3.6k
views
Cutadapt using issue
cutadapt trimming trim_galore
updated 7.4 years ago by 20 • written 7.6 years ago by ▴ 30
0
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0
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4.6k
views
Comment: C: smRNA-seq adapter trimming cutadapt
7.5 years ago by woongjaej ▴ 30
0
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1
reply
4.6k
views
Comment: C: smRNA-seq adapter trimming cutadapt
7.5 years ago by woongjaej ▴ 30
0
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5
replies
4.6k
views
smRNA-seq adapter trimming cutadapt
cutadapt smRNA-seq trimming Illumina
7.5 years ago by woongjaej ▴ 30
0
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0
replies
3.6k
views
Comment: C: Cutadapt using issue
7.6 years ago by woongjaej ▴ 30
0
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0
replies
5.0k
views
Comment: C: trimming RNA-seq reads with adapter sequence?index? using trimmomatic
7.6 years ago by woongjaej ▴ 30
0
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1
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5.0k
views
Comment: C: trimming RNA-seq reads with adapter sequence?index? using trimmomatic
7.6 years ago by woongjaej ▴ 30
1
vote
4
replies
5.0k
views
trimming RNA-seq reads with adapter sequence?index? using trimmomatic
RNA-Seq trimmomatic adapter trim
updated 7.6 years ago by ▴ 840 • written 7.6 years ago by ▴ 30
0
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0
replies
3.3k
views
Comment: C: Identify differentially expressed genes in scatter plot
7.6 years ago by woongjaej ▴ 30
0
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0
replies
10k
views
Comment: C: How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
7.6 years ago by woongjaej ▴ 30
0
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3
replies
3.3k
views
Identify differentially expressed genes in scatter plot
RNA-Seq scatter plot DEG
updated 7.6 years ago by ▴ 990 • written 7.6 years ago by ▴ 30
1
vote
0
replies
1.9k
views
Comment: C: occupancy at common specific TF binding sites
7.6 years ago by woongjaej ▴ 30
0
votes
1
reply
10k
views
Comment: C: How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
7.6 years ago by woongjaej ▴ 30
0
votes
1
reply
1.9k
views
Comment: C: occupancy at common specific TF binding sites
7.6 years ago by woongjaej ▴ 30
1
vote
4
replies
1.9k
views
occupancy at common specific TF binding sites
ChIP-Seq R peak density bins
updated 7.6 years ago by 89k • written 7.6 years ago by ▴ 30
0
votes
1
reply
10k
views
Comment: C: How to plot ChIP-seq Density vs Distance from TSS using Homer annoted files
7.6 years ago by woongjaej ▴ 30
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