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Showing :
questions
0
votes
5
replies
2.5k
views
Bowtie1 installation problem
alignment
Mapping
Bowtie1
smallRNAs
updated 5.5 years ago by
cemdede
• 0 • written 6.0 years ago by
jaqx008
▴ 110
3
votes
8
replies
4.0k
views
Merge multiple Sam files to one big Sam file. How?
Sam
samtools
overlapZscore
heatmap
updated 5.5 years ago by
gocougs
▴ 30 • written 5.5 years ago by
jaqx008
▴ 110
1
vote
8
replies
1.4k
views
How do I predict consensus RNA structures?
RNA
RNAforester
mapping
5.6 years ago by
jaqx008
▴ 110
2
votes
7
replies
1.9k
views
How can I Rectify Segmentation fault: 11?
mapping
smrna
bowtie
updated 5.7 years ago by
h.mon
35k • written 5.7 years ago by
jaqx008
▴ 110
0
votes
5
replies
1.7k
views
Can I make GFF3 from either GFF or genome fasta file?
GFFtoGFF3
DensityMap
TEAnnotation
updated 5.7 years ago by
Beuss
▴ 140 • written 5.7 years ago by
jaqx008
▴ 110
0
votes
6
replies
2.1k
views
fastx_collapser: Invalid quality score value (char '/' ord 47 quality value -17). Why?
mapping
fastx-toolkit
_collapser
Rnaseq
5.7 years ago by
jaqx008
▴ 110
0
votes
6
replies
1.2k
views
How do I tell piRNA population suppress TEs in a bed file?
mapping
piRNAs
TEs
updated 11 months ago by
Ram
43k • written 5.7 years ago by
jaqx008
▴ 110
0
votes
2
replies
938
views
Needing help with a Count table Graph
siRNA
Counttable
mapping
loci ID
5.8 years ago by
jaqx008
▴ 110
9
votes
26
replies
10.0k
views
GREP: out of memory
Deseq2
macOS
gff
HEloci
updated 13 months ago by
Ram
43k • written 5.8 years ago by
jaqx008
▴ 110
11
votes
36
replies
34k
views
6 follow
python script error: ImportError: No module named pysam
pysam
pythonscript
.py
overlapsignature
updated 5.9 years ago by
Carlos Borroto
★ 2.1k • written 5.9 years ago by
jaqx008
▴ 110
1
vote
12
replies
2.2k
views
Difficulty installing fastx_toolkit on MAC
adaptor clipping
RNAseq
fastx_clipper
updated 6.0 years ago by
GenoMax
141k • written 6.0 years ago by
jaqx008
▴ 110
0
votes
5
replies
2.0k
views
Mapping with Fasta vs fastq
FASTA
Fastq
Mapping
BOwtie1 command
updated 6.0 years ago by
GenoMax
141k • written 6.0 years ago by
jaqx008
▴ 110
2
votes
12
replies
7.6k
views
RuntimeError: dictionary changed size during iteration
siRNA
BAM
Overlappping.py
python
runtime error
6.0 years ago by
jaqx008
▴ 110
0
votes
5
replies
1.9k
views
Analyzing .fasta file.
fasta
protein-evolution
phylogenetic-tree
updated 13 months ago by
Ram
43k • written 6.0 years ago by
jaqx008
▴ 110
0
votes
19
replies
3.2k
views
Convert Tblastn result in .txt to .fasta
fasta
Tblastn
Blast
updated 13 months ago by
Ram
43k • written 6.1 years ago by
jaqx008
▴ 110
2
votes
5
replies
2.5k
views
Why did Bedtools intersect output a zero byte file
Bedtools
VCF
variant calling
6.1 years ago by
jaqx008
▴ 110
1
vote
16
replies
5.4k
views
Bedtools intersect error
bedtools
vcf
variant-calling
GATK
bed
updated 13 months ago by
Ram
43k • written 6.1 years ago by
jaqx008
▴ 110
0
votes
8
replies
5.3k
views
intersection, Bed file and VCF.
Bedtools
intersect
VCF
ORFs
Variant calling
6.1 years ago by
jaqx008
▴ 110
2
votes
4
replies
1.4k
views
Understanding the VCF data from my variant calling
VCF
Variant calling
IGV
Snps
Indels
updated 6.2 years ago by
jared.andrews07
★ 16k • written 6.2 years ago by
jaqx008
▴ 110
0
votes
0
replies
522
views
Molecular Dynamics, software, how it works, what I need and How to begin
Molecular dynamics
Aptamers
molecular interactions
6.2 years ago by
jaqx008
▴ 110
0
votes
19
replies
3.8k
views
Difficulty installing GATKtoolkit
GATK
Variant calling
SNPs
Indels
6.3 years ago by
jaqx008
▴ 110
1
vote
5
replies
2.8k
views
GATK Variant calling
GATK
SNPs
Variant calling
updated 6.3 years ago by
finswimmer
16k • written 6.3 years ago by
jaqx008
▴ 110
3
votes
9
replies
1.6k
views
Confusion with grep command
grep
Deseq2
terminal
geneOrtholog
updated 6.3 years ago by
GenoMax
141k • written 6.3 years ago by
jaqx008
▴ 110
1
vote
7
replies
5.1k
views
merging multiple sorted.bam.tmp.0000.bam into a single sorted.bam file.
Bamtools
samtools
mergesorted.bam
6.3 years ago by
jaqx008
▴ 110
0
votes
7
replies
1.8k
views
Error in Generating sorted.bam
sam
RNA-Seq
variant-calling
GATK
updated 13 months ago by
Ram
43k • written 6.4 years ago by
jaqx008
▴ 110
0
votes
4
replies
2.4k
views
Error installing programs with brew. brew doctor error too
next-gen
Samtools
updated 6.4 years ago by
Alex Reynolds
35k • written 6.4 years ago by
jaqx008
▴ 110
3
votes
10
replies
6.5k
views
Split BAM file.
next-gen
alignment
updated 6.4 years ago by
Samarth Kulshrestha
▴ 280 • written 6.4 years ago by
jaqx008
▴ 110
77 results • Page
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