User: steph_tf

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steph_tf0
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Posts by steph_tf

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Comment: C: Trinity de novo assembly without reference genome (community metatranscriptome)
... could you share your email to be in contact? btw, do you speak spanish? ...
written 7 months ago by steph_tf0
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Comment: C: Input needed to find the best metatranscriptome assembler
... Hi! I would like to know how you finally deicided to perform the assembly and annotation of your data, I'm working on something very similar, and until now I'm using only Trinity. best regards! ...
written 8 months ago by steph_tf0
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Comment: C: Trinity de novo assembly without reference genome (community metatranscriptome)
... thank you for your advice! I'm already working on a cluster with Trinity, but still have some issues on the processing and have not deicided yet the final pipeline. How could I contact you? ...
written 8 months ago by steph_tf0
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Comment: C: Using Paired End And Orphaned Singles For De Novo Assembly
... Hi, have you sorted that out? Im using trinity and i'm struggling with the same problem: I want to use my single data (merged paired end reads) and left-right (unpaired reads) together for a big assembly that I want to use as a reference, if not I loose a lot of data. ...
written 8 months ago by steph_tf0
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trinity metatranscriptome assembly without reference genome
... Hi, I need advice on the processing steps for my project. It would be really nice to get some feedback on this. I want to perform de novo assembly from metatranscriptome samples, since there are different microorganisms inside, I want to use the big assembly as a reference to map then the individua ...
assembly microorganisms rna-seq written 8 months ago by steph_tf0
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Trinity de novo assembly without reference genome (community metatranscriptome)
... Hi! I need advice on the processing steps for my project. It would be really nice to get some feedback on this. I want to perform Trinity de novo assembly from metatranscriptome samples. Since there are different microorganisms inside, I want to use the big assembly as a reference to map then the i ...
trinity rna-seq metatranscriptome assembly written 9 months ago by steph_tf0 • updated 9 months ago by manuelmendoza20

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