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878
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How to extract all annotations in a genomic range from NCBI using R?
R
rentrez
NCBI
Synteny
comparative genomics
4.8 years ago by
Solowars
▴ 70
4
votes
6
replies
5.3k
views
HTTP 400: Bad request error in Biopython Entrez.efetch
python
ncbi
entrez
biopython
sequences
4.9 years ago by
Solowars
▴ 70
3
votes
6
replies
2.7k
views
Deprecated identifiers in Ensembl?
Ensembl
Orthologs
Annotation
updated 5.5 years ago by
Emily
23k • written 5.5 years ago by
Solowars
▴ 70
1
vote
3
replies
1.6k
views
Best way to identify proteins within a family?
hmmer
domain
homology
orthologs
oma
5.9 years ago by
Solowars
▴ 70
0
votes
3
replies
1.1k
views
UBERON. A way to retrieve relationships?
UBERON
ontology
GO
Homology
gene expression
6.0 years ago by
Solowars
▴ 70
3
votes
4
replies
1.7k
views
How to deal with one-to-many orthologies in PAML
paml
orthology
dN/dS
updated 6.0 years ago by
lieven.sterck
15k • written 6.0 years ago by
Solowars
▴ 70
4
votes
4
replies
2.3k
views
How to specify columns in Uniprot batch query from Uniprot IDs?
uniprot
perl
batch
proteinID
updated 6.1 years ago by
Elisabeth Gasteiger
★ 2.4k • written 6.1 years ago by
Solowars
▴ 70
5
votes
10
replies
2.5k
views
Filtering Fasta sequences by length (only one must prevail)
alignment
sequence
fasta
updated 6.3 years ago by
Pierre Lindenbaum
161k • written 6.3 years ago by
Solowars
▴ 70
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