User: suran.nambisan

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Posts by suran.nambisan

<prev • 6 results • page 1 of 1 • next >
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Comment: C: MyCC not producing any bins
... Hello Kevin MyCC.py worked on Ubuntu 16.04 OS and produced output files after clustering. Thanks Suran ...
written 4 weeks ago by suran.nambisan0
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Comment: A: MyCC not producing any bins
... Hi Kevin Thanks for your reply. The python version is given below: Python 2.7.13 :: Continuum Analytics, Inc. Let me follow up on your suggestions and then I will get back to you. regards Suran ...
written 4 weeks ago by suran.nambisan0
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Comment: A: MyCC not producing any bins
... Hi Kevin. Sorry for late reply and sorry for the mess above. Is there a way to attach the log file? I did not see any errors. And the tool just ran and ended. I saw it did produce intermediate files but since -keep was not used they were removed and finally only this log remains. I followed the w ...
written 4 weeks ago by suran.nambisan0
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Comment: A: MyCC not producing any bins
... 20190217_1355 1_rename.py /home/group_ss1/Suran/Data_MyCC/Ahk_umapped_scaffold.fa 1000 Seqs >= 1000 : 84268 Minimum contig lengh for first stage clustering: 1269 run Prodigal. /home/group_ss1/software/MyCC_related/Tools/prodigal.linux -i My.fa -a gene.aa -d gene.nuc -f gbk ...
written 4 weeks ago by suran.nambisan0 • updated 4 weeks ago by Kevin Blighe39k
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(Closed) MyCC not producing any output files
... Hello All I am unable to get any output files after running MyCC. MyCC.py mg_scaffold.fa Only the log file exists nothing else. Could you please help? Thanks Suran ...
assembly written 5 weeks ago by suran.nambisan0
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Comment: A: MyCC not producing any bins
... Hi All I have used MyCC.py but am not able to get any output except the log file. MyCC.py mg_scaffolds.fa Could you please help? Thanks Suran ...
written 5 weeks ago by suran.nambisan0

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