User: lvulliard

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lvulliard50
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Posts by lvulliard

<prev • 4 results • page 1 of 1 • next >
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Answer: A: Determine whether it is MSI (micro satellite instability) or not
... Hi! According to the [original paper](https://academic.oup.com/bioinformatics/article/30/7/1015/236553) the MSI status should be called based on a MSIsensor > 3.5. In the literature different cutoffs have been used: 4 ([here](https://www.cell.com/cell/fulltext/S0092-8674(18)30313-1?_returnURL=h ...
written 4 months ago by lvulliard50
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Comment: C: BioCircos.R: create shiny-friendly interactive multi-track circular plots in R
... [Update] Hi again, Just wanted to mention that the last update is also available on CRAN. Now other types of tracks are available, including interactive circular heatmaps and barplots! Feel free to check it out and to give feedback. Best regards. ...
written 8 months ago by lvulliard50
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Comment: C: BioCircos.R: create shiny-friendly interactive multi-track circular plots in R
... Yes, you can zoom in by scrolling with your mouse and slide to the target location. You can try it on the interactive examples displayed [in the vignette.][1] [1]: https://cran.rstudio.com/web/packages/BioCircos/vignettes/BioCircos.html ...
written 9 months ago by lvulliard50
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Tool: BioCircos.R: create shiny-friendly interactive multi-track circular plots in R
... Hello everyone, If you're interested in an easy way to create interactive Circos plots in R, and to integrate them in shiny applications or Rmarkdown documents, have a look at the BioCircos package! ![enter image description here][1] It's an [htmlwidgets][2] module wrapping the [BioCircos.js][3] ...
R shiny htmlwidgets tool circos written 9 months ago by lvulliard50

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