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Posts by zaibunnisa.t
... It is because of 0-based coordinates and 1-based coordinates. How to solve this? ...
... I am using FastaAlternateReferenceMaker to insert all SNPs from a VCF file into a reference to create a new fasta file of 41 bps (20 bps on flanking side). My end goal is to get the fasta sequence in which reference base will be replaced with the SNP in the VCF file. For this purpose, I tried the Fa ...
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