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Posts by geo.pertea
... The (belated) answer to the original problem reported here can be found in this post: https://www.biostars.org/p/292650/#293209 ...
... StringTie gave you an advice there, did you follow up on it? >Please make sure the -G annotation file uses the same naming convention for the genome sequences. In case you don't understand that message: it's about the chromosome names. The Gencode annotation uses chromosome names like *chr1*, * ...
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