User: Joe

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Joe0
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2 weeks, 4 days ago
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Posts by Joe

<prev • 7 results • page 1 of 1 • next >
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Comment: C: Using expression array data to predict ethnicty
... Awesome! I will try those algorithms. Thanks for your reply and have a good day. ...
written 4 days ago by Joe0
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Comment: C: Using expression array data to predict ethnicty
... Sorry for that. I didn't find the microarray tag. ...
written 4 days ago by Joe0
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Using expression array data to predict ethnicty
... Hi there, I try to use expression array data (not RNA-sequencing data) to predict ethnicity. Is it possible and any good methods? Many thanks! Joe ...
array expression ethnicity written 4 days ago by Joe0 • updated 3 days ago by Kevin Blighe12k
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(Closed) Can't locate Sort/Array.pm in @INC
... Hi, I install a module "Sort::Array" without root permission according others answer (https://stackoverflow.com/questions/251705/how-can-i-use-a-new-perl-module-without-install-permissions): perl Makefile.PL PREFIX=/home/username/.myModules make make test make install get the path to ForkManager f ...
software error written 11 days ago by Joe0
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Comment: C: bedtools genomecov -bg -split -ibam bamfile. error: the input file is not sorted
... Hi finswimmer, Thanks for your comment. It works after sorting the bam file by coordinates. Joe ...
written 13 days ago by Joe0
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bedtools genomecov -bg -split -ibam bamfile. error: the input file is not sorted correctly.
... Hi there, I try to run command "**bedtools genomecov -bg -split -ibam bamfile**" to obtain the bed output, while the error is showed as "**Input error: Chromosome * found in non-sequential lines. This suggests that the input file is not sorted correctly**." To solve that, I try to sort the bam file ...
software error written 13 days ago by Joe0
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samtools sort error: [bam_sort_core] merging from 3 files and 1 in-memory blocks...
... Hi there, When I run script "samtools sort -n -O SAM $bamfile", an error appeared as "[bam_sort_core] merging from 3 files and 1 in-memory blocks..." and the output file is empty? I have checked the memory and it is sufficient (256G memory can be used for the 2 G file ). Anyone can help? Joe ...
software error written 18 days ago by Joe0

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