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Can you recommend me a database of bacterial gene essentiality?
database essential genes bacteria
updated 12 weeks ago by 3.7k • written 4.9 years ago by ▴ 60
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10
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4.6k
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How to convert a multiFASTA file with DNA (nucleotide) sequences into a multiFASTA with protein (amino acid) sequences?
protein DNA multiFASTA
updated 11 weeks ago by 40k • written 5.7 years ago by ▴ 60
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1
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1.3k
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Comment: C: Is it possible to design universal primers for detection of Pseudomonas spp.?
4.2 years ago by Alec Watanabe ▴ 60
2
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5
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1.3k
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Is it possible to design universal primers for detection of Pseudomonas spp.?
primer design universal primers Pseudomonas
4.2 years ago by Alec Watanabe ▴ 60
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1.1k
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Comment: C: Is it possible to use local blastn to obtain the aligned sequences of complete r
4.2 years ago by Alec Watanabe ▴ 60
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1
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1.1k
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Comment: C: Is it possible to use local blastn to obtain the aligned sequences of complete r
4.2 years ago by Alec Watanabe ▴ 60
3
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3
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3.5k
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Best tools for pan genome analysis?
pan-genome
updated 3 months ago by 40k • written 5.0 years ago by ▴ 60
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0
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3.5k
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Answer: A: Best tools for pan genome analysis?
4.2 years ago by Alec Watanabe ▴ 60
0
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1
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1.1k
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Comment: C: Is it possible to use local blastn to obtain the aligned sequences of complete r
4.2 years ago by Alec Watanabe ▴ 60
0
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6
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1.1k
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Is it possible to use local blastn to obtain the aligned sequences of complete record files?
blastn DNA alignment
4.2 years ago by Alec Watanabe ▴ 60
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0
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2.2k
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Comment: C: average nucleotide identity (ani) of fungi
4.5 years ago by Alec Watanabe ▴ 60
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0
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1.1k
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Comment: C: Comparing the metabolic pathways of pathogen and host using KEGG?
4.5 years ago by Alec Watanabe ▴ 60
0
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2
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1.1k
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Comparing the metabolic pathways of pathogen and host using KEGG?
drug targets methodology kegg
4.5 years ago by Alec Watanabe ▴ 60
0
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0
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864
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Doubts about a subtrative proteomics approach adopted in an article
subtractive proteomics methodology
4.5 years ago by Alec Watanabe ▴ 60
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0
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1.1k
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Comment: C: How to obtain a list of proteins involved in organism specific pathways?
4.5 years ago by Alec Watanabe ▴ 60
0
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2
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1.1k
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How to obtain a list of proteins involved in organism specific pathways?
pathways
4.5 years ago by Alec Watanabe ▴ 60
0
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4
replies
1.2k
views
Help with whole genome alignment
alignment
updated 6 months ago by 40k • written 4.9 years ago by ▴ 60
1
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2
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1.1k
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Help me with BLAST pairwise alignment parameters
BLAST pairwise alignment parameters
updated 4.8 years ago by 20 • written 4.9 years ago by ▴ 60
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0
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1.1k
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Comment: C: Help me with BLAST pairwise alignment parameters
4.9 years ago by Alec Watanabe ▴ 60
0
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1
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1.2k
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Comment: C: Help with whole genome alignment
4.9 years ago by Alec Watanabe ▴ 60
0
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0
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1.4k
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Comment: C: Can you recommend me a database of bacterial gene essentiality?
4.9 years ago by Alec Watanabe ▴ 60
0
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5
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1.6k
views
Can I upload several Genbank files to RAST?
RAST Upload
updated 5.1 years ago by 20 • written 5.2 years ago by ▴ 60
1
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1
reply
720
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Should we consider unnamed genomospecies in genomic analyses?
genomospecies comparative genomics
5.1 years ago by Alec Watanabe ▴ 60
0
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0
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681
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How to apply the reverse vaccinology strategy of Rappuoli?
reverse vaccinology methodology
5.2 years ago by Alec Watanabe ▴ 60
0
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2
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1.6k
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Comment: C: Can I upload several Genbank files to RAST?
5.2 years ago by Alec Watanabe ▴ 60
0
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0
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2.3k
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Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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0
replies
1.2k
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Questions about Panseq
Panseq
updated 6 months ago by 40k • written 5.3 years ago by ▴ 60
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0
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2.3k
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Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
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2.3k
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Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
reply
2.3k
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Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
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2.3k
views
Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
reply
2.3k
views
Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
reply
2.3k
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Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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1
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2.3k
views
Comment: C: Strategy for generating a consensus sequence for 100 complete bacterial genomes?
5.3 years ago by Alec Watanabe ▴ 60
0
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15
replies
2.3k
views
Strategy for generating a consensus sequence for 100 complete bacterial genomes?
consensus seq mauve
5.3 years ago by Alec Watanabe ▴ 60
0
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0
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11k
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Comment: C: Flower plot in R ?
5.4 years ago by Alec Watanabe ▴ 60
0
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1
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11k
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Comment: C: Flower plot in R ?
5.4 years ago by Alec Watanabe ▴ 60
0
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0
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1.5k
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Comment: C: Recommendation of 3D protein structure prediction softwares
5.6 years ago by Alec Watanabe ▴ 60
1
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0
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1.5k
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Comment: C: Recommendation of 3D protein structure prediction softwares
5.6 years ago by Alec Watanabe ▴ 60
1
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4
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1.5k
views
Recommendation of 3D protein structure prediction softwares
protein modelling software 3D
updated 5.6 years ago by 21k • written 5.6 years ago by ▴ 60
0
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0
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1.2k
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Comment: C: Problems with steps 4 and 7 of GIPsy
5.6 years ago by Alec Watanabe ▴ 60
0
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2
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1.2k
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Problems with steps 4 and 7 of GIPsy
GIPsy libraries ubuntu unmet dependencies
5.6 years ago by Alec Watanabe ▴ 60
1
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0
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1.7k
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Comment: C: Renaming FASTA headers while keeping some previous information?
5.6 years ago by Alec Watanabe ▴ 60
5
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8
replies
1.7k
views
Renaming FASTA headers while keeping some previous information?
Rename FASTA Headers
updated 5.7 years ago by ▴ 370 • written 5.7 years ago by ▴ 60
0
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1
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1.7k
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Comment: C: Renaming FASTA headers while keeping some previous information?
5.7 years ago by Alec Watanabe ▴ 60
0
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1
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4.6k
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Comment: C: How to convert a multiFASTA file with DNA (nucleotide) sequences into a multiFAS
5.7 years ago by Alec Watanabe ▴ 60
0
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0
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4.6k
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Comment: C: How to convert a multiFASTA file with DNA (nucleotide) sequences into a multiFAS
5.7 years ago by Alec Watanabe ▴ 60
2
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3
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4.5k
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Answer: A: How can I convert an EMBL file into a multiFASTA file?
5.7 years ago by Alec Watanabe ▴ 60
2
votes
16
replies
4.5k
views
How can I convert an EMBL file into a multiFASTA file?
EMBL Fasta Conversion
5.7 years ago by Alec Watanabe ▴ 60
0
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0
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4.6k
views
Comment: C: How to convert a multiFASTA file with DNA (nucleotide) sequences into a multiFAS
5.7 years ago by Alec Watanabe ▴ 60
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