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Mapping metatranscriptomics rRNA reads to MAG 16S rRNA genes
RNA-Seq 16S rRNA mapping metatranscriptomics
updated 3.3 years ago by 20 • written 4.1 years ago by ▴ 30
0
votes
0
replies
673
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Is there a way to place short reads within MEGA software?
short reads phylogenetics MEGA pplacer
4.0 years ago by dark.lord ▴ 30
1
vote
2
replies
2.1k
views
How do I decide the mapping quality score in featureCounts?
featureCounts quality score rna-seq
4.1 years ago by dark.lord ▴ 30
0
votes
2
replies
1.7k
views
Recent metatranscriptomics workflow
metatranscriptomics workflow kallisto
5.8 years ago by dark.lord ▴ 30
3
votes
7
replies
3.7k
views
Any tool to assemble 16S rRNA genes at high resolution from metagenomes?
16S rRNA Assembly SPAdes reago
6.0 years ago by dark.lord ▴ 30
1
vote
4
replies
1.5k
views
Metawatt [ERROR] String out of range in Six frame Pfam module
assembly binning metawatt
updated 6.1 years ago by 161k • written 6.1 years ago by ▴ 30
3
votes
1
reply
1.2k
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Plasmidome recovery from metagenomes: why and how?
plasmids plasmid metagenome metagenomics
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 30
0
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1
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2.2k
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Can I use both paired and single end reads in the same MEGAHIT run?
megahit Assembly assembly
6.1 years ago by dark.lord ▴ 30
8
votes
3
replies
5.1k
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Trimmomatic output: how to include unpaired reads in the assembly?
megahit trimmomatic assembling trimming
6.1 years ago by dark.lord ▴ 30
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