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Posts by nathan.yeung
... do you mean to use the bowtie-build command to index the fasta file provided by the UCSC hg19 genome.fa? ...
... I'm trying to run tophat2 on RNA-seq data but it can't be accomplished as it continues to give the error message of `Couldn't Build Bowtie Index with err = 1`. The `genome.fa` and `genes.gtf` are both from the same source of UCSC hg19. Any advice and assistance would be greatly appreciated! Thank yo ...
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