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Comment:
Comment: Creating sample groups from a combination of genes for survival analysis
22 months ago by
Shred
★ 1.6k
0
votes
1
reply
2.2k
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Comment:
Comment: salmon output interpretation
23 months ago by
Shred
★ 1.6k
0
votes
1
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4.8k
views
Comment:
Comment: GATK Mutect2 tumor mode
23 months ago by
Shred
★ 1.6k
0
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1
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4.8k
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Comment:
Comment: GATK Mutect2 tumor mode
23 months ago by
Shred
★ 1.6k
0
votes
1
reply
4.8k
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Comment:
Comment: GATK Mutect2 tumor mode
23 months ago by
Shred
★ 1.6k
0
votes
1
reply
4.8k
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Comment:
Comment: GATK Mutect2 tumor mode
23 months ago by
Shred
★ 1.6k
0
votes
0
replies
976
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Comment:
Comment: Question: Design matrix (DESeq2)
23 months ago by
Shred
★ 1.6k
1
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1
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777
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Comment:
Comment: In silico evaluation of functional similarity across two sets of genes
23 months ago by
Shred
★ 1.6k
0
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1
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836
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Comment:
Comment: How can I convert this pairwise format to fasta?
2.0 years ago by
Shred
★ 1.6k
1
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0
replies
1.6k
views
Comment:
Comment: Retrieve count table from bam file using genomic coordinates
2.1 years ago by
Shred
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0
votes
1
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1.6k
views
Comment:
Comment: Retrieve count table from bam file using genomic coordinates
2.1 years ago by
Shred
★ 1.6k
0
votes
1
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1.6k
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Comment:
Comment: Retrieve count table from bam file using genomic coordinates
2.1 years ago by
Shred
★ 1.6k
0
votes
1
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1.1k
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Comment:
Comment: What is the best time saving way to loop over column elements in pandas DF and r
2.2 years ago by
Shred
★ 1.6k
0
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0
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1.2k
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Comment:
Comment: Convert excel to json with python
2.2 years ago by
Shred
★ 1.6k
0
votes
0
replies
863
views
Comment:
Comment: Index error in python
2.2 years ago by
Shred
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0
votes
1
reply
863
views
Comment:
Comment: Index error in python
2.2 years ago by
Shred
★ 1.6k
0
votes
1
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944
views
Comment:
Comment: Clean data with pandas
2.3 years ago by
Shred
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0
votes
1
reply
2.0k
views
Comment:
Comment: The conversion Ensembl ID into Gene symbol
2.3 years ago by
Shred
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0
votes
1
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778
views
Comment:
Comment: Benchmark data for variant calling assessment
2.3 years ago by
Shred
★ 1.6k
1
vote
1
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2.3k
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Comment:
Comment: Mutect2 produces 0 results for somatic mutation calling of paired-end reads (BAM
2.3 years ago by
Shred
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0
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1
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2.3k
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Comment:
Comment: Mutect2 produces 0 results for somatic mutation calling of paired-end reads (BAM
2.3 years ago by
Shred
★ 1.6k
1
vote
0
replies
776
views
Comment:
Comment: Running several rounds of the same rule in Snakemake
2.3 years ago by
Shred
★ 1.6k
1
vote
1
reply
853
views
Comment:
Comment: DEGseq - 3 conditions
2.3 years ago by
Shred
★ 1.6k
0
votes
1
reply
853
views
Comment:
Comment: DEGseq - 3 conditions
2.3 years ago by
Shred
★ 1.6k
0
votes
0
replies
1.0k
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Comment:
Comment: Htseq-count output file having a high number of __not_aligned
2.4 years ago by
Shred
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0
votes
1
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1.0k
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Comment:
Comment: Htseq-count output file having a high number of __not_aligned
2.4 years ago by
Shred
★ 1.6k
2
votes
1
reply
1.8k
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Comment:
Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
2.4 years ago by
Shred
★ 1.6k
3
votes
1
reply
1.6k
views
Comment:
Comment: Variant identified, What next?
2.5 years ago by
Shred
★ 1.6k
1
vote
1
reply
1.3k
views
Comment:
Comment: Reading in input file into a Snakemake pipeline
2.5 years ago by
Shred
★ 1.6k
0
votes
0
replies
1.6k
views
Comment:
Comment: Cannot call haplotypes on bam
2.5 years ago by
Shred
★ 1.6k
3
votes
1
reply
1.0k
views
Comment:
Comment: Feature selection for a binary classifier using mixed cancer type samples
2.5 years ago by
Shred
★ 1.6k
0
votes
1
reply
1.6k
views
Comment:
Comment: Cannot call haplotypes on bam
2.5 years ago by
Shred
★ 1.6k
0
votes
1
reply
1.6k
views
Comment:
Comment: Cannot call haplotypes on bam
2.5 years ago by
Shred
★ 1.6k
1
vote
1
reply
1.2k
views
Comment:
Comment: is there any pipeline or best practices of detecting germline neoantigen?
2.6 years ago by
Shred
★ 1.6k
0
votes
1
reply
1.4k
views
Comment:
Comment: Increased GC content after trimming RNAseq data
2.6 years ago by
Shred
★ 1.6k
0
votes
0
replies
602
views
Comment:
Comment: Wildcards Snakemake using bedtools
2.6 years ago by
Shred
★ 1.6k
1
vote
1
reply
1.9k
views
Comment:
Comment: Running salmon in alignment mode?
2.7 years ago by
Shred
★ 1.6k
0
votes
1
reply
914
views
Comment:
Comment: How to make predictions on genes not involved in a particular disease
2.7 years ago by
Shred
★ 1.6k
0
votes
0
replies
911
views
Comment:
Comment: Which statistical test should be used for comparison of a single gene expression
2.7 years ago by
Shred
★ 1.6k
0
votes
0
replies
978
views
Comment:
Comment: WGCNA functions not found
2.7 years ago by
Shred
★ 1.6k
1
vote
1
reply
2.2k
views
Comment:
Comment: For loop in R
2.7 years ago by
Shred
★ 1.6k
0
votes
0
replies
1.1k
views
Comment:
Comment: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
2.7 years ago by
Shred
★ 1.6k
1
vote
0
replies
1.9k
views
Comment:
Comment: Best transcriptome assembler
2.8 years ago by
Shred
★ 1.6k
0
votes
1
reply
1.9k
views
Comment:
Comment: Best transcriptome assembler
2.8 years ago by
Shred
★ 1.6k
1
vote
0
replies
3.7k
views
Comment:
Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.9 years ago by
Shred
★ 1.6k
1
vote
1
reply
3.5k
views
Comment:
Comment: How to get specific information from a list of PDB ID and save all in a spreadsh
2.9 years ago by
Shred
★ 1.6k
1
vote
1
reply
1.1k
views
Comment:
Comment: lncRNA analysis
2.9 years ago by
Shred
★ 1.6k
0
votes
0
replies
720
views
Comment:
Comment: why Mutect2 calls some germline variants as somatic ones?
2.9 years ago by
Shred
★ 1.6k
0
votes
0
replies
874
views
Comment:
Comment: 3' mRNAseq Bioinformatic Considerations (bulk RNAseq)
2.9 years ago by
Shred
★ 1.6k
0
votes
0
replies
2.6k
views
Comment:
Comment: featureCounts parameters
3.0 years ago by
Shred
★ 1.6k
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