User: Haji

gravatar for Haji
Haji50
Reputation:
50
Status:
New User
Location:
European Union
Last seen:
1 year ago
Joined:
8 years, 10 months ago
Email:
h********@gmail.com

Posts by Haji

<prev • 4 results • page 1 of 1 • next >
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Comment: C: How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
... Hi Josh. I also prefer the use of cytoscape, I'm just wondering about the best way to generate the input file for the specific task. I'll take a look at hive plots as well, thanks for the suggestion! ...
written 6.5 years ago by Haji50
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Comment: C: How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
... Hello Pierre & Damian. Pierre - my initial input is a list of pathways that I wish to map to the network described above. I tried to fetch the related pathways for each of the pathways listed in the KEGG db and use this data to generate a csv file (to use as input for cytoscape). However, I fou ...
written 6.5 years ago by Haji50
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How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
... Hi. I'm trying to create a network that will present all the pathways found in the KEGG database and the relations between those pathways. I want to represent each pathway as node, and compounds that are shared by two (or more...) pathways as edges. I have not found a tool to perform this task ye ...
network kegg written 6.5 years ago by Haji50 • updated 6.0 years ago by balaji40
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Finding Go Terms For Viral Annotated Genome
... Hello all. I'm trying to find the GO terms for a list of Viral gene names, originating from different genomes. I cannot think about an easy, straightforward way to do so... Is it possible that the only way to do this search is to blast the gene sequences, and then to re-assemble the list? Thanks for ...
gene written 8.9 years ago by Haji50 • updated 5.5 years ago by pld4.8k

Latest awards to Haji

Popular Question 2.5 years ago, created a question with more than 1,000 views. For How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
Popular Question 4.9 years ago, created a question with more than 1,000 views. For How To Map Kegg Data - Pathways As Nodes, Compounds As Edges.
Student 5.9 years ago, asked a question with at least 3 up-votes. For Finding Go Terms For Viral Annotated Genome

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