User: sujasubramanian

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Posts by sujasubramanian

<prev • 29 results • page 1 of 3 • next >
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Comment: C: illumina HumanHT-12 v4.0 expression beadchip
... thank you kevin you always there whenever i need help.. thank you ...
written 10 days ago by sujasubramanian50
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illumina HumanHT-12 v4.0 expression beadchip
... Can anybody help me to point the difference between illumina HumanHT-12 v4.0 expression beadchip and affymetrix gene chip. ...
sequencing written 11 days ago by sujasubramanian50
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... biocLite('affy') library(affy) ensembl=useMart("ensembl") ensembl=useDataset("hsapiens_gene_ensembl",mart=ensembl) MyBioinfData<-ReadAffy() eset.rma<-rma(MyBioinfData) affy package is used for normalisation, and get the eset (expression set data ), i directly link thi ...
written 18 days ago by sujasubramanian50 • updated 18 days ago by Kevin Blighe37k
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... from where i get the infn about pseudogenes, is that ok i reject them from my analysis ...
written 19 days ago by sujasubramanian50
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... hello, i have used the support materials from affymetrix support site, instead of using refseq/ensembl i am using alignment column vales for my studies , so i can get multiple probeid for each gene i considered each differently with this alignment infn, but i come across a problem related with s ...
written 19 days ago by sujasubramanian50 • updated 19 days ago by Kevin Blighe37k
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... sorry by mistake i post this here ...
written 5 weeks ago by sujasubramanian50
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Comment: A: Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... can anybody help me to find a good journal for publishing my research work, i am running out of time .Bioinformatics (SCI indexed) journal is preferable. ...
written 5 weeks ago by sujasubramanian50
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Affymetrix Human Genome U133 Plus 2.0 Array sequence analysis
... Hello i am working with Affymetrix Human Genome U133 Plus 2.0 gene expression dataset, i want to analyse each gene sequence wise, is there any option to collect the sequences corresponding to each probe id . ...
sequence written 8 weeks ago by sujasubramanian50
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array
... thank you kevin i am planning to moving forward with the dataset from Thermofisher support site: 'Current NetAffx Annotation Files: HG-U133_Plus_2 Annotations, CSV format, Release 36' , only 231 probe id is missing the external_ gene_name, but this is so far better than the previous dataset i was us ...
written 3 months ago by sujasubramanian50
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Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array
... source("http://www.bioconductor.org/biocLite.R") biocLite() ensembl=useMart("ensembl") ensembl=useDataset("hsapiens_gene_ensembl",mart=ensembl) map1 = getBM(attributes = c('affy_hg_u133_plus_2','hgnc_symbol','chromosome_name','start_position','end_position','band',"ensembl_gene_i ...
written 3 months ago by sujasubramanian50 • updated 3 months ago by Kevin Blighe37k

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Popular Question 25 days ago, created a question with more than 1,000 views. For Affymetrix Human Genome U133 Plus 2.0 Array - probe annotation with biomaRt

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