User: hosein_salehi6

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Posts by hosein_salehi6

<prev • 19 results • page 1 of 2 • next >
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Comment: C: Sheep Genome and Chromosome
... Thank you. But unfortunatly I have V4.0 version ...
written 9 days ago by hosein_salehi60
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Sheep Genome and Chromosome
... I have some coordinates from sheep chromosomes like : chr24:40902129-41709809 chr25:11035146-11097889 chr26:10400726-10968027 , How I can find genes in this coordinates by the fastest and newest db and methods . Please help me .Thanks. ...
genome written 12 days ago by hosein_salehi60 • updated 12 days ago by Pierre Lindenbaum108k
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(Closed) How I can change many names of list file
... Hi, Please help me, I have a list file(.txt) in shell, like :1a.adjust, 2a.adjust, 3a.adjust...200a.adjust. How I can rename all of them, like 1a, 2a, 3a, 4a, ...200a ...
genome written 5 weeks ago by hosein_salehi60 • updated 5 weeks ago by dominicdhall40
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Comment: C: SNPs to rs format
... Thank you for your attention .How I can to receive VCF or rs file for my data ? ...
written 10 weeks ago by hosein_salehi60
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I need a rs file for ovine (sheep) SNP array data
... I have data of ovine high-density 600K snp array. I want to change names of SNPs to rs format. So I need a rs file . How I can receive rs file for my data? ...
genome ovine snp written 10 weeks ago by hosein_salehi60 • updated 10 weeks ago by Emily_Ensembl15k
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SNPs to rs format
... I have data of ovine high-density 600K snp array ,How I can change names of SNPs to rs format ? Hi thank you for your attention This is an example of the data format . I should change only first column (names to rs format) "Name" "Chr" "Position" "WDS2.GType" "WDS2.Log R ...
snp written 10 weeks ago by hosein_salehi60 • updated 10 weeks ago by Russ300
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Comment: C: How can I extract the rows which are numbered of a big file?
... Yes I did many try, like this: join -t $'\t' -1 1 -2 1 <(sort -t $'\t' -k1,1 440s.txt) <(sort -t $'\t' -k1,1 440.txt)> Output . But output file is empty ...
written 11 weeks ago by hosein_salehi60
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Comment: C: perl extract-same-SNP.pl script
... Yes I did many try, like this: join -t $'\t' -1 1 -2 1 <(sort -t $'\t' -k1,1 440s.txt) <(sort -t $'\t' -k1,1 440.txt)> Output . But output file is empty ...
written 11 weeks ago by hosein_salehi60
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Comment: C: perl extract-same-SNP.pl script
... My system does not respond by these methods. I dont have output file ...
written 11 weeks ago by hosein_salehi60
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Comment: C: perl extract-same-SNP.pl script
... Thank you very much for your attention. Actually a student introduced to me this script, but now I dont have access to him.anyway I have a big file about 600K like this (included 6 columns): Name Chr Position GType LRR BAF ...
written 11 weeks ago by hosein_salehi60 • updated 11 weeks ago by WouterDeCoster29k

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