User: seemaviriyala

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Posts by seemaviriyala

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Comment: C: mutual rank values for distance matrix formation for co-expression analysis
... i want to create using mutual rank values from co-expression database. This is because correlation data from COEXPRESdb was clustered using Euclidean distance matrix. For which we require PCC values, but as i said latest version of COEXPRESdb gives only MR and no PRR column. ...
written 17 months ago by seemaviriyala20
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mutual rank values for distance matrix formation for co-expression analysis
... We know that earlier version of co-expression database showed that Pearson correlation coefficient (PCC) is used to calculate the mutual rank (MR) values for creating a co-expression network. However, the latest version has neglected the PCC values and displays only the MR data. So how can we use MR ...
gene assembly written 17 months ago by seemaviriyala20 • updated 17 months ago by finswimmer13k
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Comment: C: Differentiation in GSE and GDS idS
... Hi. Sean Davis, I have already gone though the GEO database, but it doesn't answer my question. In GEOmetadb, I found some unique GDS IDs like GDS15, GDS16, GDS17, GDS18, GDS19, GDS20, GDS21, GDS30 and GDS31 with common GSE ID - GSE18. My question is on what basis are these GDS IDs are common to GS ...
written 2.0 years ago by seemaviriyala20
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Differentiation in GSE and GDS idS
... Why do same GSE IDs like GSE18 have different GEO DataSet (GDS) ID numbers. On what basis you differentiate GDS, GSE and GSM Ids ...
genome written 2.0 years ago by seemaviriyala20 • updated 2.0 years ago by Sean Davis26k

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