User: Hydrogen Bond

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Posts by Hydrogen Bond

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Comment: A: how to download interface generated with PDBe PISA?
... https://www.ebi.ac.uk/msd-srv/prot_int/cgi-bin/piserver ...
written 5 weeks ago by Hydrogen Bond0
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how to download interface generated with PDBe PISA?
... I have a list of monomers, only one chain in the asymmetric unit of PBD entry. I want to generate crystal interface for these monomers using [PISA server][1]. I can do it online and download manually the interface with the larget area. How to do it via command line terminal? [1]: https://www.ebi ...
pdb pisa pdbe interfaces written 5 weeks ago by Hydrogen Bond0
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Comment: C: Get Uniprot entry name from PDB ID and chain (solved)
... Hi..! Thank you for such a nice code to get UniProt. Could you please edit the function to get the Organism of a given chain? ...
written 6 months ago by Hydrogen Bond0
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unbound structures of homodimers
... Could anyone suggest how to find unbound structures of dimers? If PISA server and author both say it is dimeric in biological unit and also dimer in asymmetric unit, then where to find unbound structure of this protein chain? ...
unboud structure dimer written 15 months ago by Hydrogen Bond0
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Where to find all available co-crystallized protein-protein complexes
... Where can I find all available co-crystallized protein-protein complexes? Is there any database of all these complexes where I can download the PDB files separately? ...
protein complexes co-crystallized written 19 months ago by Hydrogen Bond0 • updated 19 months ago by Jean-Karim Heriche21k

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