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2.3k
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Comment: C: blasting a fasta file with many, many contigs via command line
5.0 years ago by lagartija ▴ 160
0
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0
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680
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Comment: C: Arrange Table for orthogroup categorization
5.3 years ago by lagartija ▴ 160
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0
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2.0k
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Answer: A: How to extract all ONT reads that connect/overlaps two or more contigs ?
5.3 years ago by lagartija ▴ 160
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0
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853
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Comment: C: B2G missing GO terms
5.3 years ago by lagartija ▴ 160
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0
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16k
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Comment: C: fasta file to tab delimited file
5.4 years ago by lagartija ▴ 160
1
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5
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3.3k
views
running BUSCO on unknown genomes ?
assembly
updated 5.4 years ago by ▴ 90 • written 6.1 years ago by ▴ 160
0
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1
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6.1k
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Comment: C: PBJelly error at mapping level
5.4 years ago by lagartija ▴ 160
1
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1
reply
3.7k
views
Understanding assembly graphs
assembly gfa
updated 5.5 years ago by 9.2k • written 5.5 years ago by ▴ 160
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0
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911
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Answer: A: Fast all to all global alignment
5.5 years ago by lagartija ▴ 160
1
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1
reply
2.0k
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alternative to mauve : multiple alignments of whole genomes
alignment genome
5.5 years ago by lagartija ▴ 160
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0
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766
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test significance of species abundance in metagenomic data
metagenomics ecology
5.8 years ago by lagartija ▴ 160
3
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4
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4.1k
views
Hybrid assembly using MinION data + correction with Illumina. Which strategy to adopt ?
assembly
updated 5.8 years ago by ★ 2.1k • written 6.9 years ago by ▴ 160
0
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2
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2.2k
views
psiblast to get pssm. How to get a pssm from a multiple alignment ?
pssm
updated 5.9 years ago by 20 • written 5.9 years ago by ▴ 160
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0
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15k
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Comment: C: How To Create A Pssm From Fasta Homologues With Ncbi Blast+ 2.2.23
5.9 years ago by lagartija ▴ 160
0
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0
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979
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Comment: C: Mapping of metagenomic reads on genomes - length criteria ?
5.9 years ago by lagartija ▴ 160
0
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2
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979
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Mapping of metagenomic reads on genomes - length criteria ?
mapping
5.9 years ago by lagartija ▴ 160
1
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0
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1.1k
views
Answer: A: Question about shotgun Metagenomic
5.9 years ago by lagartija ▴ 160
0
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0
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950
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pssm for rpsblast
domains
6.0 years ago by lagartija ▴ 160
0
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0
replies
7.6k
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Answer: A: Relative abundance fro metagenomics samples
6.1 years ago by lagartija ▴ 160
0
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1
reply
3.3k
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Comment: C: running BUSCO on unknown genomes ?
6.1 years ago by lagartija ▴ 160
0
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1
reply
1.6k
views
masking low complexity regions in a protein database for BLAST
blast
6.2 years ago by lagartija ▴ 160
0
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0
replies
38k
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Comment: C: How Do I Do Simple Go Term Lookup Given A Gene (Or Mrna) Identifier?
6.2 years ago by lagartija ▴ 160
1
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1
reply
5.3k
views
Comment: C: How to give merged reads as input in spades
6.2 years ago by lagartija ▴ 160
1
vote
1
reply
965
views
Functionnal annotation of metagenomes
metagenomics protein function
6.2 years ago by lagartija ▴ 160
1
vote
2
replies
1.1k
views
GenBank ID to GO term
annotation metagenomics
updated 6.2 years ago by 8.4k • written 6.2 years ago by ▴ 160
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0
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1.1k
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Comment: C: GenBank ID to GO term
6.2 years ago by lagartija ▴ 160
0
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0
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1.9k
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Comment: C: Annotation of assembled metagenomic data
6.2 years ago by lagartija ▴ 160
5
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3
replies
1.9k
views
Annotation of assembled metagenomic data
metagenomics taxonomy
updated 6.2 years ago by 9.2k • written 6.2 years ago by ▴ 160
0
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0
replies
4.4k
views
Answer: A: Classify Or Align ?
6.2 years ago by lagartija ▴ 160
0
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0
replies
1.4k
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Comment: C: use blast+ to blast fine domains in proteins
6.8 years ago by lagartija ▴ 160
0
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1
reply
1.4k
views
Comment: C: use blast+ to blast fine domains in proteins
6.8 years ago by lagartija ▴ 160
3
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6
replies
1.4k
views
use blast+ to blast fine domains in proteins
alignment
6.8 years ago by lagartija ▴ 160
2
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4
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6.0k
views
How to annotate nodes in Cytoscape
software error
6.8 years ago by lagartija ▴ 160
0
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0
replies
6.0k
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Comment: A: How to annotate nodes in Cytoscape
6.8 years ago by lagartija ▴ 160
1
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0
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1.7k
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Answer: A: act comparaison of 2 genomes - problem with the blast output
6.8 years ago by lagartija ▴ 160
0
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0
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3.3k
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Comment: C: kmer content failling with fastqc
6.8 years ago by lagartija ▴ 160
0
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0
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6.0k
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Comment: A: How to annotate nodes in Cytoscape
6.8 years ago by lagartija ▴ 160
1
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0
replies
1.9k
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Answer: A: How to concatenate scaffolds in a plant mitochondrial genome assembly
6.8 years ago by lagartija ▴ 160
0
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1
reply
6.8k
views
Comment: C: Error in BWA-MEM running in linux
6.9 years ago by lagartija ▴ 160
0
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0
replies
3.3k
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Comment: Comment: Evaluating the quality of draft genomes: checkm vs reapr
updated 3.0 years ago by 45k • written 6.9 years ago by ▴ 160
0
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0
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1.2k
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Comment: C: R fisher test two condition significantly different
6.9 years ago by lagartija ▴ 160
0
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0
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2.0k
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Answer: A: ERROR: File supplied on command line; use -s, -pacbio-raw, -pacbio-corrected, -n
6.9 years ago by lagartija ▴ 160
0
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0
replies
2.3k
views
Comment: C: new using pore tools. extract fast
6.9 years ago by lagartija ▴ 160
0
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1
reply
2.3k
views
Comment: C: new using pore tools. extract fast
6.9 years ago by lagartija ▴ 160
0
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2
replies
2.3k
views
Comment: C: new using pore tools. extract fast
6.9 years ago by lagartija ▴ 160
0
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0
replies
2.3k
views
Comment: C: new using pore tools. extract fast
6.9 years ago by lagartija ▴ 160
0
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10
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2.3k
views
new using pore tools. extract fast
next-gen
6.9 years ago by lagartija ▴ 160
0
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0
replies
8.0k
views
Comment: C: Oxford Nanopore and Illumina hybrid assembly
6.9 years ago by lagartija ▴ 160
0
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3
replies
8.0k
views
Comment: C: Oxford Nanopore and Illumina hybrid assembly
6.9 years ago by lagartija ▴ 160
0
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0
replies
4.1k
views
Comment: C: Hybrid assembly using MinION data + correction with Illumina. Which strategy to
6.9 years ago by lagartija ▴ 160
102 results • Page 2 of 3
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