User: england_bioinformatics_team

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Posts by england_bioinformatics_team

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Are there any working GNU parallel or similar Shell code examples on how to run Pilon, Prokka, VT and Snpeff tools on a batch of input files?
... Are there any working GNU parallel or similar Shell code examples on how to run Pilon, Prokka, VT and Snpeff tools on a batch of input files? ...
shell parallel snpeff gnu prokka written 19 months ago by england_bioinformatics_team20 • updated 19 months ago by Joe15k
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Are there any GNU parallel or similar Shell/Bash code examples on how to run Snap and BWA aligners on a batch of paired .fastq files?
... Are there any GNU parallel or similar Shell/Bash code examples on how to run Snap and BWA aligners on a batch of paired .fastq files? We have almost a 1000 of them. Thx. ...
snap parallel shell gnu bwa written 19 months ago by england_bioinformatics_team20 • updated 19 months ago by ATpoint26k

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