User: ahadli.farid
ahadli.farid • 20
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Posts by ahadli.farid
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3
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6 follow
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... Hello everyone,
We are planning to analyze around 70 to 80 BAM files (for SNV detection) in the lab. However, we lack the proper hardware as our PI wants to be sure that we can do the analysis before he invests in anything. Do you think that AWS EC2 T micro would suffice, at least for a brief perio ...
written 2.6 years ago by
ahadli.farid • 20
• updated
2.5 years ago by
Friederike ♦ 6.7k
0
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... Hello,
We analyzed TCGA miRNA-seq read counts of LUAD project. The reads are mapped as "hsa-let-7a-2" for example, with no indication about 3p or 5p mature forms. Is there a way to identify which reads are coming from which mature form?
Thanks
...
written 2.7 years ago by
ahadli.farid • 20
0
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473
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... Hello everyone,
I need a miRNA-seq dataset(or database) of samples obtained from blood of the NSCLC patients. Any suggestion is appreciated. Thanks in advance ...
written 2.8 years ago by
ahadli.farid • 20
1
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... Thank you a lot! It helped.
...
written 2.8 years ago by
ahadli.farid • 20
0
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1.9k
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... 901c2a13-dc84-4bfb-af07-7ce7e709599e
3b13a55a-11a2-4120-867d-489a5d190c0d
File IDs above corresponds to TCGA-44-6775-01A ...
written 2.8 years ago by
ahadli.farid • 20
• updated
2.8 years ago by
GenoMax ♦ 96k
2
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1
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1.9k
views
1
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... Hi everyone,
I have recently downloaded miRNA sequencing data of LUAD project from TCGA. However, there seems to be some File IDs which corresponds to the same Sample ID. How should I handle them? Take the Average? Thanks in advance.
**Hope the post is appropriate for this site. ...
written 2.8 years ago by
ahadli.farid • 20
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