User: seqall

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seqall0
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Posts by seqall

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Comment: C: RefSeq transcripts *.rna.fna.gz files
... Thanks a lot for your info, Kevin! After investigation and inquiry of this two sets, it turns out that the "*.rna.fna.gz" files at: ftp://ftp.ncbi.nlm.nih.gov/refseq/H_sapiens/mRNA_Prot/ are the latest and contain newer versions of transcripts. They have mRNA sequences: grep -e ">" human.all ...
written 3 months ago by seqall0
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RefSeq transcripts *.rna.fna.gz files
... A very basic question: What's the difference between the "*.rna.fna.gz" files at: ftp://ftp.ncbi.nlm.nih.gov/refseq/H_sapiens/mRNA_Prot/ and "GRCh38_latest_rna.fna.gz" at: ftp://ftp.ncbi.nlm.nih.gov/refseq/H_sapiens/annotation/GRCh38_latest/refseq_identifiers/? Are the RNA sequences in "GRCh38_la ...
sequence rna-seq written 3 months ago by seqall0

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