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questions
0
votes
3
replies
252
views
Reformatting Merged and Unmerged Paired-End Files
illumina
fastp
fastqc
bbmap
updated 5 weeks ago by
GenoMax
141k • written 5 weeks ago by
young_bioinformatician
▴ 230
5
votes
5
replies
1.2k
views
long view SNPs in vcf file
bcftools
Variant-Calling
SNP
freebayes
vcftools
updated 6 weeks ago by
yzliu01
▴ 10 • written 17 months ago by
young_bioinformatician
▴ 230
1
vote
3
replies
396
views
eggNOG versus Diamond blastp
diamond
eggNOG
protein
functional
updated 10 weeks ago by
Dunois
★ 2.5k • written 10 weeks ago by
young_bioinformatician
▴ 230
1
vote
2
replies
599
views
How to manage GO terms for metagenomics
metagenome
gene-ontology
GO
updated 11 weeks ago by
geneontologyhelp
▴ 350 • written 18 months ago by
young_bioinformatician
▴ 230
6
votes
23
replies
1.4k
views
How to speed Salmon index up
metagenome
genome
salmon
3 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
330
views
How to handle KEGG orthologous IDs involved multiple pathways
KEGG
annotation
metagenome
functional
gene
14 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
1.1k
views
How to combine eggnog and interproscan
pfam
eggnog
blast
interproscan
annotation
17 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
641
views
Change ploidy level in vcf file
vcf
freebayes
SNP
vcftools
bcftools
updated 18 months ago by
4galaxy77
2.8k • written 18 months ago by
young_bioinformatician
▴ 230
3
votes
6
replies
1.9k
views
PLINK - individual variance with the SNPs weights
plink
snp
variant
population
pca
19 months ago by
young_bioinformatician
▴ 230
0
votes
0
replies
363
views
How to (or not to) interpret the annotation abundance result from metagenome
gene
abundance
GO
annotation
metagenome
22 months ago by
young_bioinformatician
▴ 230
0
votes
4
replies
695
views
Considering two and more variation in polyploidy
Population
SNP
Variant
genomic
Calling
23 months ago by
young_bioinformatician
▴ 230
0
votes
2
replies
694
views
PCA biplot for SNPs data
SNP
Calling
PCA
Variant
2.1 years ago by
young_bioinformatician
▴ 230
1
vote
3
replies
749
views
Constructing reference-based draft genome
Assembly
genome
next-gen
3.8 years ago by
young_bioinformatician
▴ 230
0
votes
0
replies
625
views
Schematic overview of metabolic pathways for genomic data
assembly
genome
pathway
KEGG
prokaryote
3.9 years ago by
young_bioinformatician
▴ 230
4
votes
4
replies
9.8k
views
GSVA and SSGSEA for RNA-Seq TPM data
RNA-Seq
GSVA
R
updated 4.4 years ago by
Kevin Blighe
87k • written 4.4 years ago by
young_bioinformatician
▴ 230
2
votes
5
replies
1.4k
views
Gene Set Enrichment Analysis
R
GSEA
RNA-Seq
4.5 years ago by
young_bioinformatician
▴ 230
5
votes
12
replies
1.4k
views
16s RNA Results
gene
sequence
updated 5.0 years ago by
nora
▴ 40 • written 5.0 years ago by
young_bioinformatician
▴ 230
2
votes
5
replies
2.0k
views
About bioinformatics thesis
RNA-Seq
updated 6.0 years ago by
Sishuo Wang
▴ 230 • written 6.0 years ago by
young_bioinformatician
▴ 230
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