User: Sus

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Sus0
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Posts by Sus

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Comment: C: 16S rRNA classification pipeline
... Right now I have illumina data targeting V3 & V4 ...
written 9 days ago by Sus0
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16S rRNA classification pipeline
... Hello everyone, I have 16S data and I'm trying to identify what genus/species etc. are in my samples and their relative abundance. It's my first time working with 16S data and I'm also not used to classification, I'm trying to improve what I already did and understand some concepts. As of today, ...
16s classifcation rna-seq written 10 days ago by Sus0 • updated 8 days ago by Kevin600
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Comment: C: Need Bioinformatics Help - Analyzing Unknown Dna Sequence
... Just a quick tip for using `omictools.com`, if you land on the annoying "subscribe for free" page, just use private navigation. ...
written 11 weeks ago by Sus0
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Trying to get consensus sequence from paired end alignment
... Hello ! I am trying to get a consensus sequence from my BAM file. For the context, I'm working with paired-end reads in fastq format, so far I've done: * Building the BWA index for my reference genome * Alignin with the BWA mem following this command: `bwa mem -t 16 ref.fa R1_1.fq R1_2.fq > al ...
paired-end alignment samtools bwa written 8 months ago by Sus0
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Some explanation about what a paired-end sequencing really means
... Hi ! I'm currently a student and I have a hard time understanding some basics of bioinformatics; I'm currently learning about *alignment*, *filtering*, *variant calling* and such so my question might look silly but here it is anyway. I have some trouble about how you work with paired-end sequencing ...
paired-end alignment written 8 months ago by Sus0 • updated 8 months ago by andrew.j.skelton735.5k

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Popular Question 11 weeks ago, created a question with more than 1,000 views. For Some explanation about what a paired-end sequencing really means

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