User: neutrinoscientist

Reputation:
0
Status:
New User
Last seen:
1 month ago
Joined:
5 months ago
Email:
n****************@gmail.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by neutrinoscientist

<prev • 10 results • page 1 of 1 • next >
0
votes
0
answers
72
views
0
answers
3D bipartite Network visualization
... I have a dataset of microbes and phenotype. And I want to create a 3D bipartite network visualization using javascript. Any help in how to implement this and which lib I should use? I found that d3 implements this but in 2D. I tried to search similar questions, but didn't find any. Any help pleas ...
next-gen written 5 weeks ago by neutrinoscientist0 • updated 5 weeks ago by RamRS18k
0
votes
1
answer
200
views
1
answers
Comment: C: Phylogeny tree from a set of taxa
... its, a phylogeny tree (species and their classification: kingdom, phylum, class, order ....) ...
written 4 months ago by neutrinoscientist0
0
votes
1
answer
200
views
1
answers
Comment: C: Phylogeny tree from a set of taxa
... excuse me what you mean by relevant sequences? ...
written 4 months ago by neutrinoscientist0
1
vote
1
answer
200
views
1
answer
Phylogeny tree from a set of taxa
... I have set of taxa and I want to generate dynamically a phylogeney tree file based on a reference database. EX. the users will choose the set of taxa that they're interested in, from ~1000 taxa and the I should create the corresponding phylogeney tree. are there any R packages to create a tree fro ...
taxa species phylogenetic tree newick taxonomy written 4 months ago by neutrinoscientist0 • updated 4 months ago by Jean-Karim Heriche16k
0
votes
1
answer
241
views
1
answer
Phylogeny Tree based on SILVA classification
... Hello, have a list of species (taxa) and i want to generate a phylogeny tree using SILVA. How to do this? any help please. Thanks. ...
taxonomy written 4 months ago by neutrinoscientist0 • updated 4 months ago by Chirag Parsania980
0
votes
1
answer
526
views
1
answers
Comment: C: How to convert tree in phylip format into newick format
... I have a tree in phylip format and i want to convert it to newick format ...
written 5 months ago by neutrinoscientist0
0
votes
1
answer
526
views
1
answers
Comment: C: How to convert tree in phylip format into newick format
... not working Traceback (most recent call last): File "convert_trees.py", line 9, in Phylo.convert(infile,intype, outfile, outtype) File "/home/maria/.local/lib/python2.7/site-packages/Bio/Phylo/_io.py", line 90, in convert return write(trees, out_file, out_format, **kwargs) File "/hom ...
written 5 months ago by neutrinoscientist0
0
votes
1
answer
526
views
1
answers
Comment: C: How to convert tree in phylip format into newick format
... python convert_trees.py phyliptree.phy phylip mytree.nwk newick ...
written 5 months ago by neutrinoscientist0 • updated 5 months ago by h.mon20k
0
votes
1
answer
526
views
1
answers
Comment: C: How to convert tree in phylip format into newick format
... am so sorry for adding this as an answer. sorry its just in mistake. its still give error. Traceback (most recent call last): File "convert_trees.py", line 9, in Phylo.convert(infile,intype, outfile, outtype) File "/home/x/.local/lib/python2.7/site-packages/Bio/Phylo/_io.p ...
written 5 months ago by neutrinoscientist0 • updated 5 months ago by h.mon20k
0
votes
1
answer
526
views
1
answers
Comment: A: How to convert tree in phylip format into newick format
... File "/home/x/.local/lib/python2.7/site-packages/Bio/AlignIO/__init__.py", line 234, in write raise ValueError("Unknown format '%s'" % format) ValueError: Unknown format 'newick' any help? ...
written 5 months ago by neutrinoscientist0 • updated 5 months ago by genomax57k

Latest awards to neutrinoscientist

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1835 users visited in the last hour