User: Ankur B. Sharma

Reputation:
10
Status:
New User
Location:
Nanyang Technological University, Singapore
Last seen:
1 month ago
Joined:
2 years, 2 months ago
Email:
a***********@gmail.com

Trying to learn genomics and data analysis

Posts by Ankur B. Sharma

<prev • 5 results • page 1 of 1 • next >
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Comment: A: Homer error, how to call homer properly in a script? and how to know that it's a
... You should open the findMotifsGenome.pl script and change the path to homer in your system. Hope it helps! ...
written 6 months ago by Ankur B. Sharma10
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Comment: C: RNA seq analysis using Ruvseq: Am I doing it right?
... Thank you so much @genomax ...
written 11 months ago by Ankur B. Sharma10
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RNA-seq analysis using RUVSeq: am I doing it right?
... Hi guys, I am trying to learn and analyze my RNA-seq data. I have no prior experience in r or python but with the help of online materials, I did manage to learn the basics ( I hope so). Cutting to the chase, I am analyzing RNA-seq data from two samples: 2MO (replicate 1 and replicate 2) and 8MO (re ...
degs ruvseq rna-seq edger written 11 months ago by Ankur B. Sharma10 • updated 11 months ago by Charles Warden7.8k
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featureCounts error with 150bp Paired end RNA seq data
... Hi everyone, I am new to Linux based data analysis. I am using Subread package fetaureCounts to count the number of reads. I am using bam files (obtained after aligning fastq files to mm10 using STAR) as input files for featureCounts but facing this error. Please help me in troubleshooting this erro ...
ngs featurecounts paired-end rna-seq star written 12 months ago by Ankur B. Sharma10 • updated 11 months ago by swbarnes28.1k
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I wanted to check this file for check gene expression but the gene and transcript id are starting from 1000
... Hi Guys, I am new here and I am trying to analyse one ENCODE data set. I have gene quantification file with an extension of .tsv I wanted to check this file for check gene expression but the gene and transcript id are starting from 1000 I am new in bioinformatics but I am trying to learn. please su ...
encode gene expression rna-seq written 2.2 years ago by Ankur B. Sharma10

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