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133
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Diffbind and DESeq2 comparison for differential sites
diffbind deseq2
updated 15 days ago by 43k • written 21 days ago by ▴ 500
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211
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Comment: Comment: Why counting by diffbind and featurecounts differ?
28 days ago by Ankit ▴ 500
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2
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211
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Why counting by diffbind and featurecounts differ?
featurecounts diffbind
28 days ago by Ankit ▴ 500
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0
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366
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Comment: Comment: Guidance for connecting a rare phenotype to a genotype in a small family sample
11 weeks ago by Ankit ▴ 500
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1
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366
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Comment: Comment: Guidance for connecting a rare phenotype to a genotype in a small family sample
11 weeks ago by Ankit ▴ 500
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1
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1.0k
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Comment: Comment: sc-RNA seq pipeline
3 months ago by Ankit ▴ 500
1
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0
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890
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Comment: Comment: heatmap does not look like good
3 months ago by Ankit ▴ 500
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1
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890
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Comment: Comment: heatmap does not look like good
3 months ago by Ankit ▴ 500
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0
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250
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Metagene / Average Profile Plots background correction required or not?
chip-seq cutandrun IgG
updated 4 months ago by 43k • written 4 months ago by ▴ 500
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0
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528
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Answer: Answer: Annotate list of GSMxxxx GEO sample IDs with matching source GSExxx dataset iden
4 months ago by Ankit ▴ 500
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0
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639
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Comment: Comment: Normalization and Genome-Wide Comparisons with Chipseq
4 months ago by Ankit ▴ 500
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0
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546
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Comment: Comment: Enrichment profiles from counts
4 months ago by Ankit ▴ 500
1
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1
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639
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Comment: Comment: Normalization and Genome-Wide Comparisons with Chipseq
4 months ago by Ankit ▴ 500
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0
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406
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Comment: Comment: .str to .bed /.bim/.fam file conversion
4 months ago by Ankit ▴ 500
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1
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406
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Comment: Comment: .str to .bed /.bim/.fam file conversion
4 months ago by Ankit ▴ 500
2
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1
reply
639
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Comment: Comment: Normalization and Genome-Wide Comparisons with Chipseq
4 months ago by Ankit ▴ 500
0
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1
reply
546
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Comment: Comment: Enrichment profiles from counts
4 months ago by Ankit ▴ 500
3
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1
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756
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Comment: Comment: merging replicates
4 months ago by Ankit ▴ 500
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0
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831
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Comment: Comment: frequency plot for peaks
4 months ago by Ankit ▴ 500
1
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2
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831
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Comment: Comment: frequency plot for peaks
5 months ago by Ankit ▴ 500
0
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1
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831
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Comment: Comment: frequency plot for peaks
5 months ago by Ankit ▴ 500
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0
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1.2k
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Comment: Comment: R based query about making pairwise matrix
7 months ago by Ankit ▴ 500
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0
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1.2k
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Comment: Comment: R based query about making pairwise matrix
7 months ago by Ankit ▴ 500
0
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1
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1.2k
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Comment: Comment: R based query about making pairwise matrix
7 months ago by Ankit ▴ 500
0
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2
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1.2k
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Comment: Comment: R based query about making pairwise matrix
7 months ago by Ankit ▴ 500
6
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10
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1.2k
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Making pairwise matrix using ChIP-Seq peak binding matrix in R
R matrix binding Chip-seq
7 months ago by Ankit ▴ 500
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2
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720
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Network analysis for two Factors
chip-seq network-analysis
updated 7 months ago by 43k • written 14 months ago by ▴ 500
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0
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720
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Comment: Comment: Network analysis for two Factors
14 months ago by Ankit ▴ 500
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1
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1.3k
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Comment: Comment: Make large matrix data interpretable. How?
15 months ago by Ankit ▴ 500
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1
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1.6k
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Comment: Comment: Tools / Packages to assess allele specific methylation?
15 months ago by Ankit ▴ 500
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1
reply
1.3k
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Comment: Comment: Make large matrix data interpretable. How?
15 months ago by Ankit ▴ 500
0
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1
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1.6k
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Comment: Comment: Tools / Packages to assess allele specific methylation?
15 months ago by Ankit ▴ 500
3
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6
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1.6k
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Tools / Packages to assess allele specific methylation?
SNP Bismark allele-specific-methylation
updated 15 months ago by 6.4k • written 2.5 years ago by ▴ 500
6
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8
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1.3k
views
Make large matrix data interpretable. How?
R matrix
updated 15 months ago by ★ 27k • written 15 months ago by ▴ 500
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0
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1.3k
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Comment: Comment: Make large matrix data interpretable. How?
15 months ago by Ankit ▴ 500
1
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1
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562
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How to determine methylation state of loci with C to T mutation?
Methylation Mutation DNA
updated 16 months ago by ▴ 30 • written 16 months ago by ▴ 500
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0
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682
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Comment: Comment: How to get the genes from an identified motif using HOMER?
17 months ago by Ankit ▴ 500
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1
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2.3k
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Comment: Comment: Tools to obtain sequence from bam file
19 months ago by Ankit ▴ 500
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0
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656
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Comment: Comment: How to obtain GO:Slim terms for multiple GO:terms
19 months ago by Ankit ▴ 500
1
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2
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656
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How to obtain GO:Slim terms for multiple GO:terms
GO GOterms GoSlim
19 months ago by Ankit ▴ 500
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0
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1.1k
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Comment: Comment: High Redundancy Rate in MACS2 Peak Calling for TF ChIP-Seq
19 months ago by Ankit ▴ 500
0
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0
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755
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Comment: Comment: How can I make a reference genome from multiple genomes?
19 months ago by Ankit ▴ 500
0
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1
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1.1k
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Comment: Comment: High Redundancy Rate in MACS2 Peak Calling for TF ChIP-Seq
19 months ago by Ankit ▴ 500
0
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1
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2.3k
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Comment: Comment: Tools to obtain sequence from bam file
19 months ago by Ankit ▴ 500
0
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1
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2.3k
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Comment: Comment: Tools to obtain sequence from bam file
19 months ago by Ankit ▴ 500
5
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13
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2.3k
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Tools to obtain sequence from bam file
sequencing Bam indels
updated 19 months ago by ★ 3.8k • written 20 months ago by ▴ 500
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2
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2.3k
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Comment: Comment: Tools to obtain sequence from bam file
20 months ago by Ankit ▴ 500
0
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0
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648
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Comment: Comment: Genome-wide enrichment of histone marks and correlation with gene expression: Ap
20 months ago by Ankit ▴ 500
0
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2
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648
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Genome-wide enrichment of histone marks and correlation with gene expression: Approach/Tools?
histone genomic rna-seq chip-seq chromhmm
20 months ago by Ankit ▴ 500
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0
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3.2k
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Comment: Comment: error while testing nextflow with --genome GRCh38
21 months ago by Ankit ▴ 500
241 results • Page 1 of 5
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