Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
7.7k
views
Comment: Comment: Error while running PCAtools (Error in svd(x, nu = nu, nv = nv) : infinite or mi
2.3 years ago by mohammedtoufiq91 ▴ 250
2
votes
4
replies
7.7k
views
Error while running PCAtools (Error in svd(x, nu = nu, nv = nv) : infinite or missing values in 'x')
missMDA R PCAtools PCA
updated 10 months ago by 43k • written 2.3 years ago by ▴ 250
0
votes
0
replies
42k
views
Comment: Comment: Batch effects : ComBat or removebatcheffects (limma package) ?
2.3 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
718
views
Comment: Comment: Combining Microarray and RNA-Seq datasets visualization and comparison
updated 2.4 years ago by 82k • written 2.4 years ago by ▴ 250
0
votes
1
reply
718
views
Combining Microarray and RNA-Seq datasets visualization and comparison
ComBat microarray sva RNAseq expression gene
updated 2.4 years ago by 82k • written 2.4 years ago by ▴ 250
2
votes
2
replies
2.5k
views
Exporting normalized counts data from DeSeq2
DESeq2 normalization expression RNA-seq
updated 19 months ago by 43k • written 2.6 years ago by ▴ 250
0
votes
0
replies
2.5k
views
Comment: Comment: Exporting normalized counts data from DeSeq2
2.6 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.2k
views
Comment: Comment: Combining RNA-Seq read counts from 2 lanes of the same sample (.txt file)
2.6 years ago by mohammedtoufiq91 ▴ 250
1
vote
2
replies
1.2k
views
Combining RNA-Seq read counts from 2 lanes of the same sample (.txt file)
expression featurecounts counts rna-seq gene
2.6 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
4.2k
views
Comment: Comment: How to convert log2 scale RNA-Seq expression data to linear scale data
2.7 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.5k
views
Comment: Comment: Calculate fold change in edgeR with one sample per condition
2.7 years ago by mohammedtoufiq91 ▴ 250
4
votes
5
replies
1.5k
views
Calculate fold change in edgeR with one sample per condition
R edgeR expression rna-seq differential
2.7 years ago by mohammedtoufiq91 ▴ 250
8
votes
6
replies
4.2k
views
How to convert log2 scale RNA-Seq expression data to linear scale data
expression edgeR R rna-seq fold-change
updated 2.7 years ago by 13k • written 2.7 years ago by ▴ 250
0
votes
2
replies
4.2k
views
Comment: Comment: How to convert log2 scale RNA-Seq expression data to linear scale data
2.7 years ago by mohammedtoufiq91 ▴ 250
9
votes
7
replies
2.7k
views
Averaging duplicates of a gene in RNA-Seq dataset
expression differential average R rna-seq
updated 2.8 years ago by ▴ 60 • written 2.8 years ago by ▴ 250
0
votes
0
replies
2.7k
views
Comment: Comment: Averaging duplicates of a gene in RNA-Seq dataset
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
2.7k
views
Comment: Comment: Averaging duplicates of a gene in RNA-Seq dataset
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.0k
views
Comment: Comment: How to create gene level data from a probe level data?
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.0k
views
Comment: Comment: How to create gene level data from a probe level data?
2.8 years ago by mohammedtoufiq91 ▴ 250
2
votes
4
replies
1.0k
views
How to create gene level data from a probe level data?
R sum mean gene microarray
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
721
views
Comment: Comment: How to calculate the difference between the RNA-Seq individual samples?
2.8 years ago by mohammedtoufiq91 ▴ 250
1
vote
2
replies
721
views
How to calculate the difference between the RNA-Seq individual samples?
comparison expression edgeR replicates R
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
40k
views
Comment: Comment: LogFC and LogCPM
2.8 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.5k
views
Comment: Comment: Calculate fold change in edgeR with one sample per condition
2.9 years ago by mohammedtoufiq91 ▴ 250
1
vote
1
reply
493
views
Flooring (adjusting) values in Gene Expression Microarray data analysis?
gene-expression microarray R
updated 2.9 years ago by 82k • written 2.9 years ago by ▴ 250
0
votes
1
reply
2.8k
views
How to increase the size of the top annotation bars in Complexheatmap
plot annotation ComplexHeatmap heatmap
3.0 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
2.8k
views
Answer: Answer: How to increase the size of the top annotation bars in Complexheatmap
3.0 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
1.2k
views
Comment: Comment: How to sort multi columns on long dataframe in R
3.0 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
1.2k
views
Comment: Comment: How to sort multi columns on long dataframe in R
3.0 years ago by mohammedtoufiq91 ▴ 250
1
vote
5
replies
1.2k
views
How to sort multi columns on long dataframe in R
data.frame Order R dplyr plyr
updated 3.0 years ago by ▴ 140 • written 3.0 years ago by ▴ 250
4
votes
4
replies
2.4k
views
Customize fold change legend values in ComplexHeatmap
ComplexHeatmap circlize colorRamp2 R matrix
updated 3.3 years ago by 20 • written 3.5 years ago by ▴ 250
0
votes
0
replies
2.4k
views
Comment: C: Customize fold change legend values in ComplexHeatmap
3.5 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
2.4k
views
Comment: C: Customize fold change legend values in ComplexHeatmap
3.5 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
5.0k
views
Comment: C: How to visualize Boxplot with using fold change values in ggplot2 in R
3.7 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
5.0k
views
Comment: C: How to visualize Boxplot with using fold change values in ggplot2 in R
3.7 years ago by mohammedtoufiq91 ▴ 250
6
votes
5
replies
5.0k
views
How to visualize Boxplot with using fold change values in ggplot2 in R
Boxplot ggplot2 R fold change
updated 3.7 years ago by 13k • written 3.7 years ago by ▴ 250
0
votes
0
replies
2.8k
views
Comment: C: Batch effect identification using PCA
3.9 years ago by mohammedtoufiq91 ▴ 250
1
vote
5
replies
2.8k
views
Batch effect identification using PCA
PCA qRT-PCR R targeted-assay Batch-Effect
updated 9 days ago by 43k • written 3.9 years ago by ▴ 250
0
votes
1
reply
2.8k
views
Comment: C: Batch effect identification using PCA
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
1.5k
views
Comment: C: PCA plot on genes and color by batch and plate information
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.5k
views
Comment: C: PCA plot on genes and color by batch and plate information
3.9 years ago by mohammedtoufiq91 ▴ 250
1
vote
5
replies
1.5k
views
PCA plot on genes and color by batch and plate information
pca factoextra ggfortify ggplot2 reshape2
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.9k
views
Comment: C: Unable to locate libraries in latest version of R 4.0.0
3.9 years ago by mohammedtoufiq91 ▴ 250
3
votes
5
replies
1.9k
views
Unable to locate libraries in latest version of R 4.0.0
R library missing r studio installation
updated 3.9 years ago by 20 • written 3.9 years ago by ▴ 250
0
votes
0
replies
1.9k
views
Comment: C: Unable to locate libraries in latest version of R 4.0.0
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
2.3k
views
Comment: C: Error while using ComplexHeatmap
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
2.3k
views
Comment: C: Error while using ComplexHeatmap
3.9 years ago by mohammedtoufiq91 ▴ 250
2
votes
5
replies
2.3k
views
Error while using ComplexHeatmap
R data.frame ComplexHeatmap heatmap clustering
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
1
reply
1.5k
views
How to combine different data types and perform PCA in R
PCA Microarray RNA-Seq data frame R
3.9 years ago by mohammedtoufiq91 ▴ 250
0
votes
0
replies
1.0k
views
Comment: C: Error while plotting in ggplot2
4.0 years ago by mohammedtoufiq91 ▴ 250
191 results • Page 2 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6