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3
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202
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Answer: Answer: Advanced search for the sequences on NCBI website
6 days ago by a.zielezinski 10k
3
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0
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271
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Answer: Answer: How a fastq.gz file is formatted?
18 days ago by a.zielezinski 10k
3
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1
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501
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Answer: Answer: How can I remove the sequences that contain ambiogous amino acids from a multipl
20 days ago by a.zielezinski 10k
2
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0
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255
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Answer: Answer: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
21 days ago by a.zielezinski 10k
0
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0
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323
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Comment: Comment: Only getting 25 results from UniProt REST ID Mapping
6 weeks ago by a.zielezinski 10k
3
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1
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323
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Answer: Answer: Only getting 25 results from UniProt REST ID Mapping
6 weeks ago by a.zielezinski 10k
0
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0
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210
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Comment: Comment: How many nr database subdirectories are there?
6 weeks ago by a.zielezinski 10k
4
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1
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440
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Answer: Answer: UniProt REST Mapping Problem
6 weeks ago by a.zielezinski 10k
0
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1
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325
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Answer: Answer: virus classification
5 months ago by a.zielezinski 10k
1
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1
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354
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Comment: Comment: Too Many Protein Sequences To Align, Advice?
5 months ago by a.zielezinski 10k
1
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1
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354
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Answer: Answer: Too Many Protein Sequences To Align, Advice?
5 months ago by a.zielezinski 10k
3
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2
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286
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Ortholog clusters in Bacteria
orthologs gene family bacteria GtDB
updated 5 months ago by ★ 20k • written 5 months ago by 10k
0
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0
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291
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Comment: Comment: Can ETE3 list all bacterial species present in NCBI Taxonomy?
5 months ago by a.zielezinski 10k
1
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2
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291
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Can ETE3 list all bacterial species present in NCBI Taxonomy?
NCBI ETE3 taxonomy
5 months ago by a.zielezinski 10k
0
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0
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662
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Comment: Comment: proteins global alignment using BLOSUM80
7 months ago by a.zielezinski 10k
1
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1
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662
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Answer: Answer: proteins global alignment using BLOSUM80
7 months ago by a.zielezinski 10k
3
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1
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448
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Any tool to identify HGT events based on gene and species trees?
hgt phylogeny tree
updated 10 months ago by ★ 2.6k • written 10 months ago by 10k
1
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1
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1.7k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
10 months ago by a.zielezinski 10k
1
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1
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1.7k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
10 months ago by a.zielezinski 10k
0
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0
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500
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Comment: Comment: How to download all the genome fasta file for plants?
10 months ago by a.zielezinski 10k
0
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1
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1.7k
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Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
10 months ago by a.zielezinski 10k
0
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0
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481
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Comment: Comment: create protein database for local Blast
11 months ago by a.zielezinski 10k
0
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1
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1.4k
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Comment: Comment: Sorting and writing multifasta entries to new fasta files
11 months ago by a.zielezinski 10k
4
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1
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1.4k
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Answer: Answer: Sorting and writing multifasta entries to new fasta files
11 months ago by a.zielezinski 10k
0
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0
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1.4k
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Comment: Comment: Sorting and writing multifasta entries to new fasta files
11 months ago by a.zielezinski 10k
2
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0
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910
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Comment: Comment: Flipping a DNA sequence (not reverse complementing) using command line/samtools?
12 months ago by a.zielezinski 10k
4
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1
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910
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Answer: Answer: Flipping a DNA sequence (not reverse complementing) using command line/samtools?
12 months ago by a.zielezinski 10k
1
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1
reply
1.7k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
12 months ago by a.zielezinski 10k
1
vote
1
reply
1.7k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
12 months ago by a.zielezinski 10k
1
vote
1
reply
1.7k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
12 months ago by a.zielezinski 10k
0
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0
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595
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Comment: Comment: How to collapse leaves with the same name in ETE3 tree?
13 months ago by a.zielezinski 10k
2
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2
replies
595
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How to collapse leaves with the same name in ETE3 tree?
collapse python ete3 tree
13 months ago by a.zielezinski 10k
0
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0
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1.1k
views
Comment: Comment: How to find the fasta file with maxium number of amino acids?
13 months ago by a.zielezinski 10k
1
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1
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1.1k
views
Answer: Answer: How to find the fasta file with maxium number of amino acids?
13 months ago by a.zielezinski 10k
0
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0
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13k
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Comment: Comment: BLOSUM62 in Python
15 months ago by a.zielezinski 10k
2
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0
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348
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Answer: A: How do I make my code go through all through my list in my file.
16 months ago by a.zielezinski 10k
4
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1
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479
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Answer: C: blastn with short sequences gives no results in the corresponding genome
18 months ago by a.zielezinski 10k
1
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1
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480
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Comment: C: Problem with Bio.SeqIO
19 months ago by a.zielezinski 10k
1
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1
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692
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Comment: C: Get closest taxa of a target species in a phylogeny
20 months ago by a.zielezinski 10k
4
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1
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692
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Answer: A: Get closest taxa of a target species in a phylogeny
20 months ago by a.zielezinski 10k
19
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0
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26k
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Answer: A: Difference between NCBI non-redundant and refseq database
21 months ago by a.zielezinski 10k
3
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0
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523
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Answer: A: Need help with Pairwise Alignment module in iterating over the alignment
21 months ago by a.zielezinski 10k
0
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1
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523
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Comment: C: Need help with Pairwise Alignment module in iterating over the alignment
21 months ago by a.zielezinski 10k
0
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0
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708
views
Comment: C: Printing for each specific sequence and its residue in msa , every msa position
22 months ago by a.zielezinski 10k
1
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1
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708
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Answer: A: Printing for each specific sequence and its residue in msa , every msa position
22 months ago by a.zielezinski 10k
0
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1
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994
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Comment: C: How to combine p-values of differentially expressed genes from different timepoi
23 months ago by a.zielezinski 10k
0
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0
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626
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Comment: C: Calculate Ka/Ks using examples of two sequences.
23 months ago by a.zielezinski 10k
2
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1
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37k
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Answer: A: python 3.8 'No module named pip'
2.1 years ago by a.zielezinski 10k
0
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0
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1.6k
views
Comment: C: Comparing multiple columns from 2 files using awk, perl or python
2.2 years ago by a.zielezinski 10k
0
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0
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1.6k
views
Comment: C: Comparing multiple columns from 2 files using awk, perl or python
2.2 years ago by a.zielezinski 10k
412 results • Page 1 of 9
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