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Comment:
Comment: Performing Needleman-Wunsch Global Alignment for multiple mutant proteins agains
29 days ago by
Andrzej Zielezinski
11k
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0
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7.3k
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Comment:
Comment: Where to find BLAST+ default parameters?
3 months ago by
Andrzej Zielezinski
11k
3
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5
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2.0k
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How to collapse leaves with the same name in ETE3 tree?
python
ete3
updated 7 months ago by
Yogesh
• 0 • written 3.3 years ago by
Andrzej Zielezinski
11k
0
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0
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22k
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Comment:
Comment: how do I run repeat masker
9 months ago by
Andrzej Zielezinski
11k
0
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0
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1.6k
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Comment:
Comment: Get a reference phylogenetic tree of known taxa from GTDB
10 months ago by
Andrzej Zielezinski
11k
1
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0
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895
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Answer:
Answer: Is reciprocal best hit method applicable for non-coding RNA to find orthologs?
15 months ago by
Andrzej Zielezinski
11k
4
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0
replies
917
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Answer:
Answer: Tool for aligning short protein sequences
20 months ago by
Andrzej Zielezinski
11k
2
votes
0
replies
815
views
Answer:
Answer: Choosing right statistical test in genomics
21 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.6k
views
Answer:
Answer: Global Alignment
21 months ago by
Andrzej Zielezinski
11k
1
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0
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1.2k
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Comment:
Comment: understand the gene result in ncbi
22 months ago by
Andrzej Zielezinski
11k
0
votes
1
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3.5k
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Comment:
Comment: fasta sequences into non-overlapping k-mers using python
23 months ago by
Andrzej Zielezinski
11k
3
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1
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3.5k
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Answer:
Answer: fasta sequences into non-overlapping k-mers using python
23 months ago by
Andrzej Zielezinski
11k
3
votes
1
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1.5k
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Answer:
Answer: Extracting k-mer counts from multiple genome sequence files
23 months ago by
Andrzej Zielezinski
11k
4
votes
2
replies
1.3k
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Answer:
Answer: Filtering a fasta file based on blast results file
24 months ago by
Andrzej Zielezinski
11k
3
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1
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4.5k
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Answer:
Answer: How to delete spaces in rows from csv file in Python
24 months ago by
Andrzej Zielezinski
11k
0
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1
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4.5k
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Comment:
Comment: How to delete spaces in rows from csv file in Python
2.0 years ago by
Andrzej Zielezinski
11k
0
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1
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4.5k
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Comment:
Comment: How to delete spaces in rows from csv file in Python
2.0 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
2.7k
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Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
0
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0
replies
2.7k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
2.7k
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Answer:
Answer: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
1
vote
0
replies
2.7k
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Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.7k
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Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.7k
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Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.1k
views
Answer:
Answer: Number of sequences in RefSeq.
2.0 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
2.7k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
2.0 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.1k
views
Comment:
Comment: Making my python code better
2.0 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.1k
views
Comment:
Comment: Parsing a genbank file and outputting specific feature information to a csv usin
2.1 years ago by
Andrzej Zielezinski
11k
2
votes
0
replies
5.4k
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Comment:
Comment: get the uniprot accession from ensembl protein ID
2.1 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.1k
views
Answer:
Answer: Parsing a genbank file and outputting specific feature information to a csv usin
2.1 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
812
views
Answer:
Answer: extracting data from genbank file
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
2.1k
views
Answer:
Answer: From fastq files to fasta
2.1 years ago by
Andrzej Zielezinski
11k
2
votes
0
replies
1.1k
views
Answer:
Answer: how to filter fasta file?
2.1 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
1.6k
views
Comment:
Comment: BLAST, set a limit to the number of hits in output
2.1 years ago by
Andrzej Zielezinski
11k
1
vote
0
replies
3.4k
views
Comment:
Comment: Sequence identity between two protein sequences
2.1 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
3.4k
views
Answer:
Answer: Sequence identity between two protein sequences
2.1 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.4k
views
Comment:
Comment: Python complex formula using the items of a dictionary (or a list of dictionarie
2.1 years ago by
Andrzej Zielezinski
11k
5
votes
2
replies
1.4k
views
Answer:
Answer: Python complex formula using the items of a dictionary (or a list of dictionarie
2.1 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
779
views
Answer:
Answer: Advanced search for the sequences on NCBI website
2.2 years ago by
Andrzej Zielezinski
11k
4
votes
0
replies
967
views
Answer:
Answer: How a fastq.gz file is formatted?
2.2 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.4k
views
Answer:
Answer: How can I remove the sequences that contain ambiogous amino acids from a multipl
2.2 years ago by
Andrzej Zielezinski
11k
3
votes
0
replies
1.2k
views
Answer:
Answer: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
2.2 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.7k
views
Comment:
Comment: Only getting 25 results from UniProt REST ID Mapping
2.3 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
1.7k
views
Answer:
Answer: Only getting 25 results from UniProt REST ID Mapping
2.3 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
772
views
Comment:
Comment: How many nr database subdirectories are there?
2.3 years ago by
Andrzej Zielezinski
11k
4
votes
1
reply
1.5k
views
Answer:
Answer: UniProt REST Mapping Problem
2.3 years ago by
Andrzej Zielezinski
11k
0
votes
1
reply
977
views
Answer:
Answer: virus classification
2.6 years ago by
Andrzej Zielezinski
11k
1
vote
1
reply
1.1k
views
Comment:
Comment: Too Many Protein Sequences To Align, Advice?
2.6 years ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.1k
views
Answer:
Answer: Too Many Protein Sequences To Align, Advice?
2.6 years ago by
Andrzej Zielezinski
11k
3
votes
2
replies
855
views
Ortholog clusters in Bacteria
orthologs
gene
family
bacteria
GtDB
updated 2.6 years ago by
Mensur Dlakic
★ 28k • written 2.6 years ago by
Andrzej Zielezinski
11k
0
votes
0
replies
812
views
Comment:
Comment: Can ETE3 list all bacterial species present in NCBI Taxonomy?
2.7 years ago by
Andrzej Zielezinski
11k
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