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2
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1
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1.4k
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Answer: Answer: proteins global alignment using BLOSUM80
2.3 years ago by Andrzej Zielezinski 11k
3
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1
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841
views
Any tool to identify HGT events based on gene and species trees?
hgt phylogeny tree
updated 2.5 years ago by 3.6k • written 2.5 years ago by 11k
1
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1
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4.2k
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Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.6 years ago by Andrzej Zielezinski 11k
1
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1
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4.2k
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Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.6 years ago by Andrzej Zielezinski 11k
0
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0
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855
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Comment: Comment: How to download all the genome fasta file for plants?
2.6 years ago by Andrzej Zielezinski 11k
0
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1
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4.2k
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Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.6 years ago by Andrzej Zielezinski 11k
0
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0
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1.1k
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Comment: Comment: create protein database for local Blast
2.6 years ago by Andrzej Zielezinski 11k
0
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1
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3.0k
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Comment: Comment: Sorting and writing multifasta entries to new fasta files
2.6 years ago by Andrzej Zielezinski 11k
4
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1
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3.0k
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Answer: Answer: Sorting and writing multifasta entries to new fasta files
2.6 years ago by Andrzej Zielezinski 11k
0
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0
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3.0k
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Comment: Comment: Sorting and writing multifasta entries to new fasta files
2.6 years ago by Andrzej Zielezinski 11k
2
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0
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1.5k
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Comment: Comment: Flipping a DNA sequence (not reverse complementing) using command line/samtools?
2.7 years ago by Andrzej Zielezinski 11k
4
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1
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1.5k
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Answer: Answer: Flipping a DNA sequence (not reverse complementing) using command line/samtools?
2.7 years ago by Andrzej Zielezinski 11k
1
vote
1
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4.2k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.7 years ago by Andrzej Zielezinski 11k
1
vote
1
reply
4.2k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.7 years ago by Andrzej Zielezinski 11k
1
vote
1
reply
4.2k
views
Comment: Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
2.7 years ago by Andrzej Zielezinski 11k
0
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0
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1.7k
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Comment: Comment: How to collapse leaves with the same name in ETE3 tree?
2.8 years ago by Andrzej Zielezinski 11k
0
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0
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2.0k
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Comment: Comment: How to find the fasta file with maxium number of amino acids?
2.8 years ago by Andrzej Zielezinski 11k
1
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1
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2.0k
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Answer: Answer: How to find the fasta file with maxium number of amino acids?
2.8 years ago by Andrzej Zielezinski 11k
0
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0
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20k
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Comment: Comment: BLOSUM62 in Python
2.9 years ago by Andrzej Zielezinski 11k
2
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0
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619
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Answer: A: How do I make my code go through all through my list in my file.
3.1 years ago by Andrzej Zielezinski 11k
5
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1
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859
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Answer: C: blastn with short sequences gives no results in the corresponding genome
3.2 years ago by Andrzej Zielezinski 11k
1
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1
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744
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Comment: C: Problem with Bio.SeqIO
3.3 years ago by Andrzej Zielezinski 11k
1
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1
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1.2k
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Comment: C: Get closest taxa of a target species in a phylogeny
3.4 years ago by Andrzej Zielezinski 11k
4
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1
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1.2k
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Answer: A: Get closest taxa of a target species in a phylogeny
3.4 years ago by Andrzej Zielezinski 11k
21
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0
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29k
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Answer: A: Difference between NCBI non-redundant and refseq database
3.4 years ago by Andrzej Zielezinski 11k
3
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0
replies
1.0k
views
Answer: A: Need help with Pairwise Alignment module in iterating over the alignment
3.5 years ago by Andrzej Zielezinski 11k
0
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1
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1.0k
views
Comment: C: Need help with Pairwise Alignment module in iterating over the alignment
3.5 years ago by Andrzej Zielezinski 11k
0
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0
replies
1.2k
views
Comment: C: Printing for each specific sequence and its residue in msa , every msa position
3.5 years ago by Andrzej Zielezinski 11k
1
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1
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1.2k
views
Answer: A: Printing for each specific sequence and its residue in msa , every msa position
3.5 years ago by Andrzej Zielezinski 11k
0
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1
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1.5k
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Comment: C: How to combine p-values of differentially expressed genes from different timepoi
3.6 years ago by Andrzej Zielezinski 11k
0
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0
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917
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Comment: C: Calculate Ka/Ks using examples of two sequences.
3.6 years ago by Andrzej Zielezinski 11k
2
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1
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43k
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Answer: A: python 3.8 'No module named pip'
3.8 years ago by Andrzej Zielezinski 11k
0
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0
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2.8k
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Comment: C: Comparing multiple columns from 2 files using awk, perl or python
3.9 years ago by Andrzej Zielezinski 11k
0
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0
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2.8k
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Comment: C: Comparing multiple columns from 2 files using awk, perl or python
3.9 years ago by Andrzej Zielezinski 11k
2
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0
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2.8k
views
Answer: A: Comparing multiple columns from 2 files using awk, perl or python
3.9 years ago by Andrzej Zielezinski 11k
0
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0
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2.0k
views
Comment: C: ID query with entrez -- invalid ID - rllib.error.HTTPError: HTTP Error 400: Bad
3.9 years ago by Andrzej Zielezinski 11k
6
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2
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2.0k
views
Answer: A: ID query with entrez -- invalid ID - rllib.error.HTTPError: HTTP Error 400: Bad
3.9 years ago by Andrzej Zielezinski 11k
3
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0
replies
1.9k
views
Answer: A: Script to obtain human protein sequences by the gene symbols
3.9 years ago by Andrzej Zielezinski 11k
1
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0
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1.4k
views
Answer: C: Makeblastdb refseq viral protein sequence (Blast db v5)
3.9 years ago by Andrzej Zielezinski 11k
1
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0
replies
1.9k
views
Answer: A: Online pipeline for MSA and NJ tree generation bootstrap supported
4.0 years ago by Andrzej Zielezinski 11k
5
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0
replies
3.5k
views
Answer: A: Reverse translate to all possible codons
4.0 years ago by Andrzej Zielezinski 11k
0
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0
replies
880
views
Comment: C: leafs in the MESH tree
4.1 years ago by Andrzej Zielezinski 11k
3
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1
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880
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Answer: A: leafs in the MESH tree
4.1 years ago by Andrzej Zielezinski 11k
4
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0
replies
2.6k
views
Answer: A: Biopython gives ValueError: Sequences must all be the same length even though se
4.2 years ago by Andrzej Zielezinski 11k
2
votes
1
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4.4k
views
Comment: C: kraken and kraken2: Downloading taxonomy tree data...rsync: error while loading
4.2 years ago by Andrzej Zielezinski 11k
4
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1
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2.0k
views
Answer: A: Download all bacterial proteins from the same family
updated 4.3 years ago by 43k • written 8.2 years ago by 11k
3
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0
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3.0k
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Answer: A: Using io.StringIO() with biopython Phylo parse
updated 4.3 years ago by 43k • written 8.2 years ago by 11k
4
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1
reply
1.6k
views
Answer: A: Divergence time of all species compared to human
updated 4.3 years ago by 43k • written 8.2 years ago by 11k
3
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0
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17k
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Answer: A: How to split fasta into seperate files by chromosome (in the header)
updated 4.3 years ago by 43k • written 8.2 years ago by 11k
6
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1
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5.8k
views
Answer: A: Where have the bacterial genomes gone in Genbank ftp?
updated 4.3 years ago by 43k • written 8.3 years ago by 11k
446 results • Page 2 of 9
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