Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
1.0k
views
Answer: Answer: Unusual FastQC sequence distribution from small RNA seq
8 weeks ago by Barry Digby ★ 1.1k
2
votes
1
reply
342
views
Answer: Answer: How do I extract gene names from different portions of my heatmap?
6 months ago by Barry Digby ★ 1.1k
1
vote
1
reply
424
views
Comment: Comment: circular RNA analysis workflow
7 months ago by Barry Digby ★ 1.1k
0
votes
5
replies
1.8k
views
Missing gene symbols in bustools output
bustools scanpy kallisto single-cell scRNA
updated 8 months ago by • 0 • written 3.2 years ago by ★ 1.1k
1
vote
1
reply
1.3k
views
Comment: Comment: error while testing nextflow with --genome GRCh38
8 months ago by Barry Digby ★ 1.1k
1
vote
0
replies
367
views
Answer: Answer: CIRIexplorer2 annotate
9 months ago by Barry Digby ★ 1.1k
0
votes
1
reply
4.0k
views
Comment: Comment: TCGA transcriptome data to R (DESeq2)
10 months ago by Barry Digby ★ 1.1k
0
votes
0
replies
4.0k
views
Comment: Comment: TCGA transcriptome data to R (DESeq2)
10 months ago by Barry Digby ★ 1.1k
0
votes
1
reply
4.0k
views
Comment: Comment: TCGA transcriptome data to R (DESeq2)
11 months ago by Barry Digby ★ 1.1k
13
votes
9
replies
4.0k
views
Tutorial: TCGA transcriptome data to R (DESeq2)
TCGA GDC DESeq2
updated 9 months ago by ▴ 40 • written 15 months ago by ★ 1.1k
2
votes
0
replies
704
views
Comment: Comment: how does annotate circular RNA ?
15 months ago by Barry Digby ★ 1.1k
1
vote
1
reply
704
views
Answer: Answer: how does annotate circular RNA ?
15 months ago by Barry Digby ★ 1.1k
3
votes
0
replies
2.0k
views
Answer: Answer: need some help on how to use DESeq2 for TCGA data
15 months ago by Barry Digby ★ 1.1k
3
votes
1
reply
596
views
Answer: Answer: GEOquery: unable to fetch raw CEL files
17 months ago by Barry Digby ★ 1.1k
0
votes
0
replies
1.9k
views
Answer: Answer: BUSCO installation and run
19 months ago by Barry Digby ★ 1.1k
1
vote
0
replies
2.0k
views
Comment: Comment: Add NES value to GSEA plot
21 months ago by Barry Digby ★ 1.1k
1
vote
1
reply
1.3k
views
Comment: Comment: TCGA library type information
22 months ago by Barry Digby ★ 1.1k
0
votes
1
reply
1.3k
views
Comment: Comment: TCGA library type information
22 months ago by Barry Digby ★ 1.1k
3
votes
0
replies
1.1k
views
Comment: C: Getting standard 12-column format for a list of genes
2.0 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
551
views
Comment: C: how to annotate Circular RNA gene type?
2.0 years ago by Barry Digby ★ 1.1k
1
vote
1
reply
551
views
Comment: C: how to annotate Circular RNA gene type?
2.0 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
2.0k
views
Comment: C: nextflow set tuple issue
2.0 years ago by Barry Digby ★ 1.1k
4
votes
1
reply
2.0k
views
Answer: A: nextflow set tuple issue
2.0 years ago by Barry Digby ★ 1.1k
1
vote
0
replies
6.4k
views
Comment: C: How to plot GSEA result?
2.1 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
2.0k
views
Comment: C: Which adapters to use for trimming?
2.2 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
2.0k
views
Comment: C: Which adapters to use for trimming?
2.2 years ago by Barry Digby ★ 1.1k
2
votes
1
reply
1.0k
views
Answer: A: How to remove X & Y chromosome genes from RNAseq data
2.2 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
1.0k
views
Comment: C: How to remove X & Y chromosome genes from RNAseq data
2.2 years ago by Barry Digby ★ 1.1k
1
vote
0
replies
6.4k
views
Comment: C: How to plot GSEA result?
2.2 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
1.4k
views
Comment: C: TCGA gene and mirna expression value
2.2 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
1.2k
views
Comment: C: Why is mapper.pl from mirdeep2 producing an empty mapping file?
2.3 years ago by Barry Digby ★ 1.1k
3
votes
2
replies
1.4k
views
Answer: A: TCGA gene and mirna expression value
2.3 years ago by Barry Digby ★ 1.1k
2
votes
2
replies
898
views
Answer: A: Help interpretating DESeq2 output
2.3 years ago by Barry Digby ★ 1.1k
3
votes
2
replies
4.3k
views
Tximport > DESeq2 (sample names)
DESeq2 tximport RNA-Seq
updated 2.3 years ago by • 0 • written 4.3 years ago by ★ 1.1k
0
votes
0
replies
4.3k
views
Answer: A: GATK Panel Of Normals (PoN)
2.4 years ago by Barry Digby ★ 1.1k
3
votes
1
reply
992
views
Answer: C: HT-Seq count data coding gene
2.4 years ago by Barry Digby ★ 1.1k
2
votes
0
replies
1.0k
views
Answer: A: Circlize genomicLabel won't plot outside.
2.4 years ago by Barry Digby ★ 1.1k
2
votes
1
reply
1.0k
views
Circlize genomicLabel won't plot outside.
Circlize
2.4 years ago by Barry Digby ★ 1.1k
2
votes
0
replies
3.6k
views
Answer: A: How to take input TCGA miRNA data in Limma R package for differential expression
2.4 years ago by Barry Digby ★ 1.1k
1
vote
0
replies
2.2k
views
Comment: C: How to select differential expressed genes using DeSeq2?
2.4 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
2.2k
views
Comment: C: How to select differential expressed genes using DeSeq2?
2.4 years ago by Barry Digby ★ 1.1k
4
votes
1
reply
2.2k
views
Answer: C: How to select differential expressed genes using DeSeq2?
2.4 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
1.6k
views
Comment: C: STAR index file for GRCH37
2.5 years ago by Barry Digby ★ 1.1k
0
votes
1
reply
941
views
Comment: C: DESeq2 analysis with high number of samples
2.5 years ago by Barry Digby ★ 1.1k
1
vote
0
replies
800
views
Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
2.5 years ago by Barry Digby ★ 1.1k
1
vote
1
reply
800
views
Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
2.5 years ago by Barry Digby ★ 1.1k
1
vote
0
replies
1.5k
views
Answer: A: GATK4 best practices: 1500 lines of code ... !?
2.6 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
2.9k
views
Exporting PATH in Dockerfile
conda docker python
2.6 years ago by Barry Digby ★ 1.1k
4
votes
1
reply
5.9k
views
Answer: A: How to prepare .gct file for GSEA software?
2.6 years ago by Barry Digby ★ 1.1k
0
votes
0
replies
1.3k
views
Answer: A: calculating fold change
2.6 years ago by Barry Digby ★ 1.1k
125 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6