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Comment: Comment: Help related to HTSEq usage specific for downstream DEXSeq analysis
3 months ago by Barry Digby ★ 1.3k
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0
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509
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Comment: Comment: Opinion on miRNA pipeline
4 months ago by Barry Digby ★ 1.3k
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1
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509
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Comment: Comment: Opinion on miRNA pipeline
4 months ago by Barry Digby ★ 1.3k
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363
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Comment: Comment: error uploading gct file to gsea
5 months ago by Barry Digby ★ 1.3k
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570
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Comment: Comment: I cannot obtain summary alignment with Bowtie2
6 months ago by Barry Digby ★ 1.3k
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0
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652
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Comment: Comment: Normal vs Tumor - Kaplan Meier Survival Analysis
updated 6 months ago by 43k • written 6 months ago by ★ 1.3k
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1
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693
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Comment: Comment: obtaining circular RNAs' sequences from circBase
6 months ago by Barry Digby ★ 1.3k
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1
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959
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Comment: Comment: No differentially expressed genes after multiple testing correction in mice
11 months ago by Barry Digby ★ 1.3k
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1
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606
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Comment: Comment: Seeking Alternative Tools for Predicting Mature microRNAs from Vertebrate Animal
12 months ago by Barry Digby ★ 1.3k
1
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1
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660
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Comment: Comment: circular RNA analysis workflow
20 months ago by Barry Digby ★ 1.3k
1
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1
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3.1k
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Comment: Comment: error while testing nextflow with --genome GRCh38
21 months ago by Barry Digby ★ 1.3k
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1
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7.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
24 months ago by Barry Digby ★ 1.3k
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7.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
24 months ago by Barry Digby ★ 1.3k
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1
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7.0k
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Comment: Comment: TCGA transcriptome data to R (DESeq2)
2.1 years ago by Barry Digby ★ 1.3k
2
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0
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1.1k
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Comment: Comment: how does annotate circular RNA ?
2.4 years ago by Barry Digby ★ 1.3k
1
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0
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3.2k
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Comment: Comment: Add NES value to GSEA plot
2.8 years ago by Barry Digby ★ 1.3k
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1
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2.2k
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Comment: Comment: TCGA library type information
2.9 years ago by Barry Digby ★ 1.3k
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1
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2.2k
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Comment: Comment: TCGA library type information
2.9 years ago by Barry Digby ★ 1.3k
3
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0
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1.6k
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Comment: C: Getting standard 12-column format for a list of genes
3.1 years ago by Barry Digby ★ 1.3k
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0
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790
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Comment: C: how to annotate Circular RNA gene type?
3.1 years ago by Barry Digby ★ 1.3k
1
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1
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790
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Comment: C: how to annotate Circular RNA gene type?
3.1 years ago by Barry Digby ★ 1.3k
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1
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2.8k
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Comment: C: nextflow set tuple issue
3.1 years ago by Barry Digby ★ 1.3k
1
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0
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9.5k
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Comment: C: How to plot GSEA result?
3.2 years ago by Barry Digby ★ 1.3k
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1
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2.8k
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Comment: C: Which adapters to use for trimming?
3.3 years ago by Barry Digby ★ 1.3k
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1
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2.8k
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Comment: C: Which adapters to use for trimming?
3.3 years ago by Barry Digby ★ 1.3k
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1
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1.6k
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Comment: C: How to remove X & Y chromosome genes from RNAseq data
3.3 years ago by Barry Digby ★ 1.3k
1
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0
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9.5k
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Comment: C: How to plot GSEA result?
3.3 years ago by Barry Digby ★ 1.3k
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0
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1.9k
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Comment: C: TCGA gene and mirna expression value
3.3 years ago by Barry Digby ★ 1.3k
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0
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1.6k
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Comment: C: Why is mapper.pl from mirdeep2 producing an empty mapping file?
3.4 years ago by Barry Digby ★ 1.3k
1
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0
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3.7k
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Comment: C: How to select differential expressed genes using DeSeq2?
3.5 years ago by Barry Digby ★ 1.3k
0
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1
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3.7k
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Comment: Comment: How to select differential expressed genes using DeSeq2?
8 months ago by Barry Digby ★ 1.3k
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0
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2.5k
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Comment: C: STAR index file for GRCH37
3.6 years ago by Barry Digby ★ 1.3k
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1
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1.4k
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Comment: C: DESeq2 analysis with high number of samples
3.6 years ago by Barry Digby ★ 1.3k
1
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0
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1.0k
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Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
3.6 years ago by Barry Digby ★ 1.3k
1
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1
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1.0k
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Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
3.6 years ago by Barry Digby ★ 1.3k
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0
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4.9k
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Comment: C: Specify output dir when downloading snpEff database?
3.7 years ago by Barry Digby ★ 1.3k
1
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0
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7.0k
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Comment: C: How to prepare .gct file for GSEA software?
3.8 years ago by Barry Digby ★ 1.3k
1
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1
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2.4k
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Comment: C: How to deal with the abnormal samples from TCGA found in a PCA?
3.8 years ago by Barry Digby ★ 1.3k
0
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1
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7.7k
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Comment: C: Nextflow using existing Conda Environments
3.8 years ago by Barry Digby ★ 1.3k
0
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1
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7.7k
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Comment: C: Nextflow using existing Conda Environments
3.8 years ago by Barry Digby ★ 1.3k
0
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0
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2.1k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
3.9 years ago by Barry Digby ★ 1.3k
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1
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2.1k
views
Comment: C: miRDeep2 problem with reads_collapsed.fa
3.9 years ago by Barry Digby ★ 1.3k
1
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0
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7.7k
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Comment: C: Nextflow using existing Conda Environments
3.9 years ago by Barry Digby ★ 1.3k
0
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0
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14k
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Comment: C: How to create a GSEA enrichment plot for the phenotypes in R?
3.9 years ago by Barry Digby ★ 1.3k
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0
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1.3k
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Comment: C: Where is a good place to find experienced, ongoing, bioinformatics help?
4.0 years ago by Barry Digby ★ 1.3k
1
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1
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2.3k
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Comment: C: Massive L2FC in DESeq2
4.0 years ago by Barry Digby ★ 1.3k
0
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1
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4.1k
views
Comment: C: can I use some interesting genes(such as a subset of DEGs from RNA-seq result) t
4.1 years ago by Barry Digby ★ 1.3k
0
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0
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1.9k
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Comment: C: Editing tools script in a docker container
4.1 years ago by Barry Digby ★ 1.3k
0
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0
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1.2k
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Comment: C: How to perform iteration task inside a docker image (RNA-seq analysis)
4.2 years ago by Barry Digby ★ 1.3k
0
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0
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2.2k
views
Comment: C: Missing gene symbols in bustools output
4.2 years ago by Barry Digby ★ 1.3k
81 results • Page 1 of 2
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