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Comment: C: Specify output dir when downloading snpEff database?
2.6 years ago by Barry Digby ★ 1.1k
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885
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Answer: A: RNA seq data analysis
2.7 years ago by Barry Digby ★ 1.1k
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5.9k
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Comment: C: How to prepare .gct file for GSEA software?
2.7 years ago by Barry Digby ★ 1.1k
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1
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1.9k
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Comment: C: How to deal with the abnormal samples from TCGA found in a PCA?
2.7 years ago by Barry Digby ★ 1.1k
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1
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
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1
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
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0
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1.4k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
2.8 years ago by Barry Digby ★ 1.1k
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1
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1.4k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
2.8 years ago by Barry Digby ★ 1.1k
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1
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1.4k
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Answer: A: miRDeep2 problem with reads_collapsed.fa
2.8 years ago by Barry Digby ★ 1.1k
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0
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5.3k
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Comment: C: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
4
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7
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5.3k
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Nextflow using existing Conda Environments
nextflow conda anaconda
updated 2.8 years ago by 70k • written 2.8 years ago by ★ 1.1k
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0
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5.3k
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Answer: A: Nextflow using existing Conda Environments
2.8 years ago by Barry Digby ★ 1.1k
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0
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9.3k
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Comment: C: How to create a GSEA enrichment plot for the phenotypes in R?
2.8 years ago by Barry Digby ★ 1.1k
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1
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9.3k
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Answer: A: How to create a GSEA enrichment plot for the phenotypes in R?
2.8 years ago by Barry Digby ★ 1.1k
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0
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996
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Comment: C: Where is a good place to find experienced, ongoing, bioinformatics help?
2.9 years ago by Barry Digby ★ 1.1k
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1
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1.7k
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Comment: C: Massive L2FC in DESeq2
2.9 years ago by Barry Digby ★ 1.1k
1
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0
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687
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circRNA - miRNA ceRNA network construction
circRNA miRNA ceRNA CSCD circinteractome
2.9 years ago by Barry Digby ★ 1.1k
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0
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807
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Answer: A: miRDeep2 Mapper "Bowtie mapping tool not installed"
2.9 years ago by Barry Digby ★ 1.1k
1
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0
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383
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Answer: A: Predict which genes might cause treatment response or lack of response
3.0 years ago by Barry Digby ★ 1.1k
1
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1
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996
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Answer: A: Where is a good place to find experienced, ongoing, bioinformatics help?
3.0 years ago by Barry Digby ★ 1.1k
0
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1
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2.5k
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Comment: C: can I use some interesting genes(such as a subset of DEGs from RNA-seq result) t
3.0 years ago by Barry Digby ★ 1.1k
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0
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1.4k
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Comment: C: Editing tools script in a docker container
3.0 years ago by Barry Digby ★ 1.1k
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4
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1.4k
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Editing tools script in a docker container
docker dockerhub singularity
3.0 years ago by Barry Digby ★ 1.1k
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0
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1.4k
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Answer: A: Editing source scripts in a container
3.0 years ago by Barry Digby ★ 1.1k
3
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0
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1.2k
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Answer: A: In need of guidance: RNA-seq analysis
3.1 years ago by Barry Digby ★ 1.1k
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0
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898
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Comment: C: How to perform iteration task inside a docker image (RNA-seq analysis)
3.1 years ago by Barry Digby ★ 1.1k
1
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1
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898
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Answer: A: How to perform iteration task inside a docker image (RNA-seq analysis)
3.1 years ago by Barry Digby ★ 1.1k
6
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8
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2.2k
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bustools transcript to gene file
bustools kallisto scRNA nextflow ensembl
3.2 years ago by Barry Digby ★ 1.1k
0
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0
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1.8k
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Comment: C: Missing gene symbols in bustools output
3.2 years ago by Barry Digby ★ 1.1k
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0
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1.8k
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Comment: C: Missing gene symbols in bustools output
3.2 years ago by Barry Digby ★ 1.1k
0
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0
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3.2k
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Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.2 years ago by Barry Digby ★ 1.1k
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1
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2.2k
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Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
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Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
1
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1
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3.2k
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Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.2k
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Comment: C: (scRNA) bustools transcript to gene file
3.2 years ago by Barry Digby ★ 1.1k
0
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1
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2.4k
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Comment: C: Final process in Nextflow not using all files in channel
3.2 years ago by Barry Digby ★ 1.1k
5
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4
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2.4k
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Final process in Nextflow not using all files in channel
nextflow
updated 3.2 years ago by 153k • written 3.2 years ago by ★ 1.1k
0
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0
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1.3k
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Comment: C: Could not locate bowtie index (miRDeep2 analysis)
3.3 years ago by Barry Digby ★ 1.1k
0
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1
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1.3k
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Comment: C: Could not locate bowtie index (miRDeep2 analysis)
3.3 years ago by Barry Digby ★ 1.1k
0
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1
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1.3k
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Comment: A: Could not locate bowtie index (miRDeep2 analysis)
3.3 years ago by Barry Digby ★ 1.1k
1
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1
reply
6.5k
views
Answer: A: How to plot GSEA result?
3.4 years ago by Barry Digby ★ 1.1k
7
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0
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4.0k
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Answer: A: mireap procedure short tutorial
3.5 years ago by Barry Digby ★ 1.1k
1
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1
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2.2k
views
Comment: C: Arraystar Human CircRNA microarray V2 annotation
3.5 years ago by Barry Digby ★ 1.1k
4
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3
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2.2k
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Arraystar Human CircRNA microarray V2 annotation
annotation microarray circRNA agilent arraystar
updated 3.5 years ago by 84k • written 3.5 years ago by ★ 1.1k
0
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1
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3.2k
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Comment: C: Counting Gene Clusters from Antismash Output
3.5 years ago by Barry Digby ★ 1.1k
0
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0
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1.1k
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Comment: C: Find 3'UTRs for species
3.6 years ago by Barry Digby ★ 1.1k
0
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0
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1.1k
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Comment: C: Find 3'UTRs for species
3.6 years ago by Barry Digby ★ 1.1k
0
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1
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1.1k
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Comment: C: Find 3'UTRs for species
3.6 years ago by Barry Digby ★ 1.1k
2
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0
replies
1.1k
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Comment: A: Find 3'UTRs for species
3.6 years ago by Barry Digby ★ 1.1k
3
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2
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4.2k
views
Answer: A: Appropriate gene IDs for enrichment analysis (with clusterProfiler)
3.6 years ago by Barry Digby ★ 1.1k
125 results • Page 2 of 3
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