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3
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1
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1.2k
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Answer: C: HT-Seq count data coding gene
3.1 years ago by Barry Digby ★ 1.3k
2
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1
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1.2k
views
Circlize genomicLabel won't plot outside.
Circlize
3.1 years ago by Barry Digby ★ 1.3k
2
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0
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1.2k
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Answer: A: Circlize genomicLabel won't plot outside.
3.1 years ago by Barry Digby ★ 1.3k
2
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0
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4.0k
views
Answer: A: How to take input TCGA miRNA data in Limma R package for differential expression
3.1 years ago by Barry Digby ★ 1.3k
1
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0
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3.1k
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Comment: C: How to select differential expressed genes using DeSeq2?
3.1 years ago by Barry Digby ★ 1.3k
0
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1
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3.1k
views
Comment: Comment: How to select differential expressed genes using DeSeq2?
3 months ago by Barry Digby ★ 1.3k
5
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1
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3.1k
views
Answer: C: How to select differential expressed genes using DeSeq2?
3.1 years ago by Barry Digby ★ 1.3k
0
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0
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2.2k
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Comment: C: STAR index file for GRCH37
3.2 years ago by Barry Digby ★ 1.3k
0
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1
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1.2k
views
Comment: C: DESeq2 analysis with high number of samples
3.2 years ago by Barry Digby ★ 1.3k
1
vote
0
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939
views
Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
3.2 years ago by Barry Digby ★ 1.3k
1
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1
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939
views
Comment: C: TCGA- which files to download for analyzing differentially expressed miRNAs
3.2 years ago by Barry Digby ★ 1.3k
1
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0
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1.8k
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Answer: A: GATK4 best practices: 1500 lines of code ... !?
3.2 years ago by Barry Digby ★ 1.3k
0
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0
replies
3.1k
views
Exporting PATH in Dockerfile
conda docker python
3.2 years ago by Barry Digby ★ 1.3k
4
votes
1
reply
6.6k
views
Answer: A: How to prepare .gct file for GSEA software?
3.3 years ago by Barry Digby ★ 1.3k
0
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0
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1.4k
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Answer: A: calculating fold change
3.3 years ago by Barry Digby ★ 1.3k
0
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0
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4.6k
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Comment: C: Specify output dir when downloading snpEff database?
3.3 years ago by Barry Digby ★ 1.3k
0
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0
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1.1k
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Answer: A: RNA seq data analysis
3.4 years ago by Barry Digby ★ 1.3k
1
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0
replies
6.6k
views
Comment: C: How to prepare .gct file for GSEA software?
3.4 years ago by Barry Digby ★ 1.3k
1
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1
reply
2.2k
views
Comment: C: How to deal with the abnormal samples from TCGA found in a PCA?
3.4 years ago by Barry Digby ★ 1.3k
0
votes
1
reply
6.9k
views
Comment: C: Nextflow using existing Conda Environments
3.4 years ago by Barry Digby ★ 1.3k
0
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1
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6.9k
views
Comment: C: Nextflow using existing Conda Environments
3.4 years ago by Barry Digby ★ 1.3k
0
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0
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1.9k
views
Comment: C: miRDeep2 problem with reads_collapsed.fa
3.5 years ago by Barry Digby ★ 1.3k
0
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1
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1.9k
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Comment: C: miRDeep2 problem with reads_collapsed.fa
3.5 years ago by Barry Digby ★ 1.3k
0
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1
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1.9k
views
Answer: A: miRDeep2 problem with reads_collapsed.fa
3.5 years ago by Barry Digby ★ 1.3k
1
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0
replies
6.9k
views
Comment: C: Nextflow using existing Conda Environments
3.5 years ago by Barry Digby ★ 1.3k
4
votes
7
replies
6.9k
views
Nextflow using existing Conda Environments
nextflow conda anaconda
updated 3.5 years ago by 78k • written 3.5 years ago by ★ 1.3k
0
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0
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6.9k
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Answer: A: Nextflow using existing Conda Environments
3.5 years ago by Barry Digby ★ 1.3k
0
votes
0
replies
13k
views
Comment: C: How to create a GSEA enrichment plot for the phenotypes in R?
3.5 years ago by Barry Digby ★ 1.3k
1
vote
1
reply
13k
views
Answer: A: How to create a GSEA enrichment plot for the phenotypes in R?
3.5 years ago by Barry Digby ★ 1.3k
0
votes
0
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1.2k
views
Comment: C: Where is a good place to find experienced, ongoing, bioinformatics help?
3.6 years ago by Barry Digby ★ 1.3k
1
vote
1
reply
2.1k
views
Comment: C: Massive L2FC in DESeq2
3.6 years ago by Barry Digby ★ 1.3k
1
vote
0
replies
782
views
circRNA - miRNA ceRNA network construction
circRNA miRNA ceRNA CSCD circinteractome
3.6 years ago by Barry Digby ★ 1.3k
0
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0
replies
1.0k
views
Answer: A: miRDeep2 Mapper "Bowtie mapping tool not installed"
3.6 years ago by Barry Digby ★ 1.3k
1
vote
0
replies
462
views
Answer: A: Predict which genes might cause treatment response or lack of response
3.6 years ago by Barry Digby ★ 1.3k
1
vote
1
reply
1.2k
views
Answer: A: Where is a good place to find experienced, ongoing, bioinformatics help?
3.6 years ago by Barry Digby ★ 1.3k
0
votes
1
reply
3.4k
views
Comment: C: can I use some interesting genes(such as a subset of DEGs from RNA-seq result) t
3.7 years ago by Barry Digby ★ 1.3k
0
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0
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1.8k
views
Comment: C: Editing tools script in a docker container
3.7 years ago by Barry Digby ★ 1.3k
1
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4
replies
1.8k
views
Editing tools script in a docker container
docker dockerhub singularity
3.7 years ago by Barry Digby ★ 1.3k
0
votes
0
replies
1.8k
views
Answer: A: Editing source scripts in a container
3.7 years ago by Barry Digby ★ 1.3k
3
votes
0
replies
1.4k
views
Answer: A: In need of guidance: RNA-seq analysis
3.8 years ago by Barry Digby ★ 1.3k
0
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0
replies
1.1k
views
Comment: C: How to perform iteration task inside a docker image (RNA-seq analysis)
3.8 years ago by Barry Digby ★ 1.3k
1
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1
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1.1k
views
Answer: A: How to perform iteration task inside a docker image (RNA-seq analysis)
3.8 years ago by Barry Digby ★ 1.3k
6
votes
8
replies
2.5k
views
bustools transcript to gene file
bustools kallisto scRNA nextflow ensembl
3.8 years ago by Barry Digby ★ 1.3k
0
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0
replies
2.0k
views
Comment: C: Missing gene symbols in bustools output
3.8 years ago by Barry Digby ★ 1.3k
0
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0
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2.0k
views
Comment: C: Missing gene symbols in bustools output
3.8 years ago by Barry Digby ★ 1.3k
0
votes
0
replies
4.0k
views
Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.9 years ago by Barry Digby ★ 1.3k
0
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1
reply
2.5k
views
Comment: C: (scRNA) bustools transcript to gene file
3.9 years ago by Barry Digby ★ 1.3k
0
votes
1
reply
2.5k
views
Comment: C: (scRNA) bustools transcript to gene file
3.9 years ago by Barry Digby ★ 1.3k
1
vote
1
reply
4.0k
views
Comment: C: How to analyze the RNAseq paired samples with DESeq2?
3.9 years ago by Barry Digby ★ 1.3k
0
votes
1
reply
2.5k
views
Comment: C: (scRNA) bustools transcript to gene file
3.9 years ago by Barry Digby ★ 1.3k
140 results • Page 2 of 3
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