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Comment: Comment: Pandas Data Frame
5 months ago by husensofteng ▴ 380
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278
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Comment: Comment: identification of overlapped, proximal and distal gene for peak regions
5 months ago by husensofteng ▴ 380
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1
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663
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Comment: Comment: Getting VCF file for the 1000 genome project with rsid
13 months ago by husensofteng ▴ 380
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830
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Answer: Answer: I'm not sure my Bulk RNAseq read counts extracted from fastq file are correct
17 months ago by husensofteng ▴ 380
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1
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910
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Answer: Answer: Naïve question about LC-MS/MS proteomic datasets : looking for ressources, studi
17 months ago by husensofteng ▴ 380
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650
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Answer: Answer: how to merge two files in two columns using bash command lines
21 months ago by husensofteng ▴ 380
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1
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1.3k
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Comment: Comment: How to find overlapping coordinates of a gtf file
21 months ago by husensofteng ▴ 380
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1.1k
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Comment: C: bedtools multiple BAM files
2.4 years ago by husensofteng ▴ 380
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856
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Comment: C: Sequence Retrieval of SARS-CoV Complete Genomes
2.4 years ago by husensofteng ▴ 380
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0
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871
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Comment: C: Visualizing alternative splicing events
2.4 years ago by husensofteng ▴ 380
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1
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871
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Comment: C: Visualizing alternative splicing events
2.4 years ago by husensofteng ▴ 380
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853
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Comment: C: Strandness of ENCODE RNA-seq data
2.4 years ago by husensofteng ▴ 380
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853
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Comment: C: Strandness of ENCODE RNA-seq data
2.4 years ago by husensofteng ▴ 380
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4
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853
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Strandness of ENCODE RNA-seq data
RNA-Seq ENCODE Assembly
2.4 years ago by husensofteng ▴ 380
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0
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771
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Comment: C: Multi-records genbank to CDS
2.6 years ago by husensofteng ▴ 380
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0
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681
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Comment: C: analyse bam file
2.6 years ago by husensofteng ▴ 380
1
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0
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719
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Answer: A: Create a database of RefSeq genes
2.6 years ago by husensofteng ▴ 380
2
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440
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Comment: C: protein database and ensembl
2.7 years ago by husensofteng ▴ 380
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440
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Comment: C: protein database and ensembl
2.7 years ago by husensofteng ▴ 380
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0
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851
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Comment: C: To remove variants that encode for PE-PPE proteins from .vcf file
2.7 years ago by husensofteng ▴ 380
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0
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578
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Comment: C: Intron retension calculation (non-model organism)?
2.7 years ago by husensofteng ▴ 380
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0
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807
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Comment: C: Whole Genome Sequencing Data Annotation
2.7 years ago by husensofteng ▴ 380
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0
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3.6k
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Comment: C: I get this error while creating database on BLAST: BLAST Database creation error
2.7 years ago by husensofteng ▴ 380
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2.4k
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Comment: C: Getting coding sequence length
2.7 years ago by husensofteng ▴ 380
0
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0
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513
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Comment: C: Searching for introns within 5'UTRs
2.7 years ago by husensofteng ▴ 380
1
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0
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1.1k
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Comment: C: Biopython SeqIO.parse not functioning for all entries in a seq
2.7 years ago by husensofteng ▴ 380
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0
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591
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Comment: C: Searching for genomic coordinates of histone/chromatin states in Roadmap epigeno
2.7 years ago by husensofteng ▴ 380
4
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1
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1.0k
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Answer: C: genomic features 3'utr and 5'utr
2.7 years ago by husensofteng ▴ 380
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1
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590
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Comment: C: How to get the best overlap
2.8 years ago by husensofteng ▴ 380
1
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1
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722
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Answer: C: Detecting potentially unannotated genes from RNA-seq alignments?
2.9 years ago by husensofteng ▴ 380
1
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0
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1.1k
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Answer: A: per sample mean coverage and standard deviation
2.9 years ago by husensofteng ▴ 380
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0
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4.0k
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Comment: C: Clarification of good pipeline for transcriptome assembly of RNA-seq data
2.9 years ago by husensofteng ▴ 380
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4
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2.6k
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GATK Interval list for processing mouse genome WGS
GATK WGS GRCm38 genome
updated 3.3 years ago by 13k • written 4.7 years ago by ▴ 380
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0
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1.5k
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Comment: C: Genomic coordinates from GENCODE annotation file
3.7 years ago by husensofteng ▴ 380
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4.4k
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Comment: C: convert genome file to transcriptome file
3.7 years ago by husensofteng ▴ 380
5
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1
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4.4k
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Answer: A: convert genome file to transcriptome file
3.7 years ago by husensofteng ▴ 380
1
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1
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1.9k
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Answer: A: Keeping only common variants in the merged VCF file
3.8 years ago by husensofteng ▴ 380
1
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1
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2.5k
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Answer: A: get GTEx mean expression by tissue
3.8 years ago by husensofteng ▴ 380
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0
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873
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Comment: C: Checking regions with high density of SNPs
3.9 years ago by husensofteng ▴ 380
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2.0k
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Comment: C: Stringtie merge assembly with extra transcripts
3.9 years ago by husensofteng ▴ 380
1
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1
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2.8k
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Answer: A: Mapping SNP position to gff file
updated 3.9 years ago by 70k • written 3.9 years ago by ▴ 380
1
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1
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2.0k
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Answer: A: Stringtie merge assembly with extra transcripts
3.9 years ago by husensofteng ▴ 380
0
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0
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731
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Job: Front-end developer for research and cancer personalized medicine platforms
javascript front-end web-portal HTML Job
3.9 years ago by husensofteng ▴ 380
1
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0
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978
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Comment: C: compare two columns of two files
3.9 years ago by husensofteng ▴ 380
1
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0
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1.1k
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Comment: C: Annotation of noncoding variants and transcription factor motifs
4.0 years ago by husensofteng ▴ 380
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0
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4.3k
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Answer: A: How to access specifically 30x NA12878 sequencing runs
4.1 years ago by husensofteng ▴ 380
1
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0
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6.4k
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Answer: A: Example datasets for RNA-Seq Differential Expression Analysis
4.1 years ago by husensofteng ▴ 380
3
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0
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891
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Answer: A: Trascription factor binding site prediction
4.1 years ago by husensofteng ▴ 380
3
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2
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1.1k
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Tool: Annotation of noncoding variants and transcription factor motifs
Tool TF Motifs noncoing variants regulatory
4.1 years ago by husensofteng ▴ 380
1
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0
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4.1k
views
Comment: C: Compute average score across multiple bed files
4.7 years ago by husensofteng ▴ 380
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