User: kirill.grigorev

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Posts by kirill.grigorev

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Comment: C: OMA Standalone: "could not read the right number of characters"
... Hi! I replaced my symlinks with copies of target files, ran OMA with -d 10 and got this: gname := homo_sapiens genomes := [danio_rerio, gallus_gallus, homo_sapiens] <-- error in ConvertGenomes = Could not read the right number of characters} Error, (in ConvertGenomes) Could not r ...
written 12 weeks ago by kirill.grigorev10
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OMA Standalone: "could not read the right number of characters"
... I'm trying to run OMA Standalone (version 2.2.0, darwin x64) on a few nucleotide FASTAs. It creates caches for several files without error (i.e, the .db, .map and .tree files), but fails on others with: `Error, (in ConvertGenomes) Could not read the right number of characters`. It's such a cryptic ...
oma oma standalone written 3 months ago by kirill.grigorev10
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Comment: C: How is the design in DESeq2 work?
... I find it pretty astonishing (but also symptomatic of the entire R universe) that the official DESeq2 tutorials neither bother to explain the nomenclature by themselves, or even provide pointers as to where one can read up on it." Analyzing RNA-seq data with DESeq2" mentions ANOVA exactly once, and ...
written 5 months ago by kirill.grigorev10

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