User: fjs5035

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fjs50350
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Comment: C: filter_fasta.py not removing sequences from fastq based on read IDs
... It does. I take it from your comment that that shouldn't happen. ...
written 16 months ago by fjs50350
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filter_fasta.py not removing sequences from fastq based on read IDs
... I'm attempting to use [filter_fasta.py][1] in macqiime to remove sequences from a fastq based on a .txt file of read IDs. filter_fasta.py -f my_reads.fastq -o filtered_reads.fq -s read_ids.txt -n The input file has 366000 reads. The output file is 366000 reads. Nothing is being removed. I ens ...
sequencing fastq sequence qiime written 16 months ago by fjs50350 • updated 16 months ago by lakhujanivijay4.5k

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