User: benjamindlee

gravatar for benjamindlee
benjamindlee30
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30
Status:
New User
Location:
Harvard University
Website:
https://GitHub.com/Ben...
Last seen:
19 hours ago
Joined:
4 months, 3 weeks ago
Email:
b***********@me.com

Posts by benjamindlee

<prev • 3 results • page 1 of 1 • next >
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News: Have you used deep learning in your research? If so, contribute to the Ten Simple Rules for Deep Learning in Biology paper!
... Hi! I'm spearheading the development of a community-written paper targeting [*PLOS Computational Biology*](http://ploscompbiol.org/) entitled [“Ten Simple Rules for Deep Learning in Biology](http://github.com/Benjamin-Lee/deep-rules)*,"* modeled off of the [Deep Review](https://github.com/greenelab/ ...
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Answer: A: Abstract images pattern from DNA sequence
... I know this is an old question but take a look at this package I just made that might be of use: [Squiggle: DNA Sequence Visualization for Humans][1] [1]: http://github.com/Lab41/squiggle ...
written 4 months ago by benjamindlee30
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Answer: A: CAI in python: SeqUtils.CodonUsage vs CAI package
... SeqUtils is actually not a correct implementation of the CAI metric (as of 6/22/18). I wrote the [CAI package](https://github.com/Benjamin-Lee/CodonAdaptationIndex) specifically out of frustration with SeqUtils.CodonUsage. In addition to being correct, the CAI package is faster and supports multiple ...
written 4 months ago by benjamindlee30

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Scholar 3 months ago, created an answer that has been accepted. For A: CAI in python: SeqUtils.CodonUsage vs CAI package

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