User: josephine.tidiane

Reputation:
10
Status:
New User
Location:
Nantes, France
Last seen:
2 months, 1 week ago
Joined:
2 months, 2 weeks ago
Email:
j****************@gmail.com

post-doctoral fellow in cancer biology

Posts by josephine.tidiane

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Comment: C: build the expression matrix step by step from GEO raw data
... Hi Kevin, I looked into maimages function code and I found that: scanarrayexpress = list(G = "Ch1 Mean", Gb = "Ch1 B Median", R = "Ch2 Mean", Rb = "Ch2 B Median"), I also found that: if (!all(cnames %in% c("G", "R", "Gb", "Rb", "E", "Eb"))) ...
written 10 weeks ago by josephine.tidiane10
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Comment: C: build the expression matrix step by step from GEO raw data
... I need to start from raw data because I want to do a multi-series analysis and I need to use the same preprocessing algorithm for all series ...
written 11 weeks ago by josephine.tidiane10
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Comment: C: build the expression matrix step by step from GEO raw data
... Hi, thank you for this post, it's very helpful! I have a question about raw file format requirement. I am also trying to analyse Agilent microarray found on GEO with platform referenced as "Homo sapiens 1X44K Custom Array". It was indicated that "Raw data were included within Sample table". I down ...
written 11 weeks ago by josephine.tidiane10

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