User: moohit21

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moohit210
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Posts by moohit21

<prev • 8 results • page 1 of 1 • next >
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Comment: A: software for Insilico Pcr
... @kevin.. Thanks for your answer, but how i am going to put 70,000 primer pairs in it, it is showing the space for only 1 primer pair ...
written 12 months ago by moohit210
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software for Insilico Pcr
... Hello Friends, I hope u all are doing good. I have desgined primers using primer_3_core and i have obtained 70,000 primer pairs, now i want to do the insilico pcr of these primers, can anybody told me any good software for insilico pcr, i am using ubuntu operating system. Any command based applicati ...
pcr ngs insilico primer computational biology written 12 months ago by moohit210
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Comment: C: SSR`s identification and primer designing
... My operating system is Ubuntu 16.04 LTS ...
written 13 months ago by moohit210
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Comment: C: SSR`s identification and primer designing
... Thank you. yes my perl is running properly. ...
written 13 months ago by moohit210
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Comment: C: SSR`s identification and primer designing
... Sir i have edited the commands in my question, pls do check ...
written 13 months ago by moohit210
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SSR`s identification and primer designing
... i am using GMATA software for SSR`s identification and primer designing, i install the programme as per direction given in the manual but while running the software i an getting error. The software works in both ways command line and user interfacae. cmmnd : perl gmata.pl -r 5 -m 2 -x 6 -s 0 ...
ssr primer gmata written 13 months ago by moohit210 • updated 13 months ago by finswimmer12k
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SSRs abundance calculation
... Hi everybody, I have a .misa file and i want to calculate abundace of classes of ssrs from that misa file, for example in dinucelotide repeats which one is repeating maximum time and same in tri, tetre,penta and hexanucleotides. is there any software or any script which can count this? Thanks in ad ...
rna-seq abundance ssrs written 13 months ago by moohit210 • updated 13 months ago by toralmanvar810
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ssrs filtering from gff3 file
... Hello everyone. I have a gff3 file of a genome and a .misa file obtained from misa.pl, is there any script or software present that can extract the ssrs that present on the genic regions of the genome or simply to say how to filter the ssrs present in gff3 file using the coordinates ? Thank you for ...
genome gff rna-seq ssrs written 13 months ago by moohit210 • updated 13 months ago by lakhujanivijay4.3k

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