User: prakashpandey1111

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Posts by prakashpandey1111

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Use of clusterProfiler R package
... I want to know what input type compareCluster supports? I performed fuzzy c-means clustering using Mfuzz & now i want to calculate enriched functional categories of each gene clusters.My initial data for clustering was of 91 uniprot ids across three time points.I did this after clustering to hav ...
functional enrichment written 4 days ago by prakashpandey11110 • updated 4 days ago by jared.andrews07750
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R package to perform functional enrichment of clustered human gene data
... I want to perform functional enrichment for my clustered data. Please suggest me R package so that i can implement it on my clustered data ...
R written 5 days ago by prakashpandey11110 • updated 4 days ago by doctor.dee00540
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Comment: C: Match multiple columns to find common elements
... I'm struggling to import table here. I used %in% but it compares 2 column at a time. I want to compare all of them simultaneously in single run ...
written 6 days ago by prakashpandey11110
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Match multiple columns to find common elements
... How to find common elements from multiple columns. say i have 20 columns(A,B,C...) & each column consists of number of elements. What i need is to find out common elements of column A in the rest of the remaining 19 columns & vice versa for other columns B,C..... & frequency ...
R written 6 days ago by prakashpandey11110 • updated 6 days ago by genomax51k
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issues regarding topGO usage
... I have a expression set of 91 uniprot ids across three time points. I performed fuzzy c-means clustering using Mfuzz & now i wish to perform enrichment analysis using topGO but i am confused with the input data required and the steps involved in to use topGO. I referred topGO manual but i'm con ...
topgo written 7 days ago by prakashpandey11110 • updated 7 days ago by Kevin Blighe23k

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