User: jr5731173

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jr57311730
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Posts by jr5731173

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specific k-mer count in multi fasta file
... Hello, I'm trying to count a specific kmer in multifasta files contained in a directory with approximately 65 thousand multifasta files, I have tried with Bioconductor but not it's possible to save all data in memory, and I would like to do this task with a perl or python script. I would like to mo ...
sequence written 2.4 years ago by jr57311730 • updated 2.4 years ago by Alex Reynolds31k
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Alignment sequences with MUSCLE
... Hello, I want to do multiple sequences alingment in all files contained in a directory, all of them with .faa extension, I want to run the muscle software in a PBS script I don't know if the next command line is correct #PBS -N muscle_core #PBS -l nodes=1:ppn=16,mem=16gb,vmem=32gb,wallt ...
alignment written 2.5 years ago by jr57311730

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