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0
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2
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252
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Regions not clear in VCF
whole-exome
variant-calling
updated 10 days ago by
Ram
43k • written 11 days ago by
priya.bmg
▴ 60
0
votes
0
replies
638
views
Comment:
Comment: Confirming called variants
5 months ago by
priya.bmg
▴ 60
0
votes
1
reply
638
views
Comment:
Comment: Confirming called variants
5 months ago by
priya.bmg
▴ 60
0
votes
5
replies
638
views
Confirming called variants
GATK
gnomAD
updated 5 months ago by
barslmn
★ 2.1k • written 5 months ago by
priya.bmg
▴ 60
0
votes
0
replies
312
views
Visualize tfrecords file from Deepvariant
gzipped
flow
tensor
Deepvariant
records
11 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
14 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
14 months ago by
priya.bmg
▴ 60
0
votes
1
reply
24k
views
Comment:
Comment: intersect VCF files
14 months ago by
priya.bmg
▴ 60
0
votes
0
replies
604
views
Comment:
Comment: Sequencing old DNA samples
17 months ago by
priya.bmg
▴ 60
1
vote
2
replies
604
views
Sequencing old DNA samples
Sequencing
17 months ago by
priya.bmg
▴ 60
0
votes
1
reply
513
views
Pandas Data Frame
vcf
GATK-SV
pandas
annotation
updated 18 months ago by
husensofteng
▴ 410 • written 18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
739
views
Comment:
Comment: Coexpression analysis
18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
739
views
Comment:
Comment: Coexpression analysis
18 months ago by
priya.bmg
▴ 60
1
vote
5
replies
739
views
Coexpression analysis
CEMitool
R
updated 10 months ago by
Ram
43k • written 18 months ago by
priya.bmg
▴ 60
0
votes
0
replies
2.7k
views
Comment:
Comment: WGCNA, module trait relationship
18 months ago by
priya.bmg
▴ 60
0
votes
0
replies
727
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
18 months ago by
priya.bmg
▴ 60
0
votes
1
reply
727
views
Comment:
Comment: Loading Traitdata file for WGCNA analysis
18 months ago by
priya.bmg
▴ 60
1
vote
4
replies
727
views
Loading Traitdata file for WGCNA analysis
R
WGCNA
updated 13 months ago by
Ram
43k • written 18 months ago by
priya.bmg
▴ 60
0
votes
0
replies
359
views
Gene prioritization
MAGMA
gene-prioritization
updated 10 months ago by
Ram
43k • written 19 months ago by
priya.bmg
▴ 60
2
votes
4
replies
1.8k
views
PacBio Raw Data File Formats
PacBio
updated 13 months ago by
Ram
43k • written 20 months ago by
priya.bmg
▴ 60
0
votes
0
replies
1.8k
views
Comment:
Comment: Lockfile command not found
20 months ago by
priya.bmg
▴ 60
0
votes
1
reply
937
views
Pacbio workflow
structural
pbsv
variants
updated 21 months ago by
Maxine
▴ 40 • written 2.3 years ago by
priya.bmg
▴ 60
0
votes
2
replies
572
views
Bacterial contamination in human DNA sample
Long-read-sequencing
Bacterial-contamination
updated 13 days ago by
Ram
43k • written 22 months ago by
priya.bmg
▴ 60
0
votes
0
replies
387
views
Methylation calling -Primrose Package
Methylation
CIGAR
PacBio
22 months ago by
priya.bmg
▴ 60
0
votes
0
replies
706
views
Comment:
Comment: Hard filtering variants
2.2 years ago by
priya.bmg
▴ 60
1
vote
2
replies
706
views
Hard filtering variants
whole
exome
data
2.2 years ago by
priya.bmg
▴ 60
0
votes
1
reply
1.8k
views
Comment:
Comment: Lockfile command not found
2.2 years ago by
priya.bmg
▴ 60
1
vote
1
reply
1.8k
views
Comment:
Comment: Lockfile command not found
2.2 years ago by
priya.bmg
▴ 60
3
votes
8
replies
1.8k
views
Lockfile command not found
Oslo
Lockfile
conda
concurrency
20 months ago by
priya.bmg
▴ 60
0
votes
0
replies
566
views
Snakemake workflow-PacBio
Snakemake
PacBio
2.3 years ago by
priya.bmg
▴ 60
0
votes
0
replies
50k
views
Comment:
Comment: Filtering Vcf File
2.3 years ago by
priya.bmg
▴ 60
0
votes
1
reply
983
views
Filtering of rare variants
filtering
Rare
variants
updated 2.4 years ago by
Pierre Lindenbaum
161k • written 2.4 years ago by
priya.bmg
▴ 60
1
vote
2
replies
1.1k
views
Shared variants
filtering
variants
GATK
updated 2.4 years ago by
sbstevenlee
▴ 480 • written 2.4 years ago by
priya.bmg
▴ 60
0
votes
1
reply
626
views
Post filtering analysis for exome data
shared
rare
Hard-filtering
variants
updated 2.4 years ago by
Pierre Lindenbaum
161k • written 2.4 years ago by
priya.bmg
▴ 60
0
votes
0
replies
456
views
False negatives -Hard filtering
calling
Variant
GATK
Exome
Concordance
2.4 years ago by
priya.bmg
▴ 60
0
votes
1
reply
557
views
Individual or joint variant call ing
exome
Filtering
analysis
variants
updated 2.5 years ago by
brunobsouzaa
▴ 830 • written 2.5 years ago by
priya.bmg
▴ 60
0
votes
1
reply
557
views
Preprocessing exome sequence
Analysis
workflow-Germline
GATK
Variant
updated 2.6 years ago by
ATpoint
81k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
626
views
Error in merged bam files
picard
GATK
NGS
2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
635
views
Mark duplicates the bam files sorted by coordinates
Spark
duplicates
Mark
updated 2.6 years ago by
benformatics
3.9k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
9
replies
2.0k
views
Exec format error in unmapped bam file
bam
samtools
updated 13 months ago by
Ram
43k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.0k
views
Comment:
Comment: Exec format error in unmapped bam file
2.6 years ago by
priya.bmg
▴ 60
0
votes
0
replies
2.2k
views
Comment:
Comment: Snakemake bwa mem
2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.2k
views
Comment:
Comment: Snakemake bwa mem
2.6 years ago by
priya.bmg
▴ 60
3
votes
7
replies
2.2k
views
Snakemake bwa mem
Snakemake
bwa
updated 16 months ago by
Ram
43k • written 2.6 years ago by
priya.bmg
▴ 60
0
votes
1
reply
2.6k
views
Comment:
Comment: Snakemake-Aligment using BWA-MEM2
2.6 years ago by
priya.bmg
▴ 60
95 results • Page
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