User: priya.bmg

1

vote

3

replies

699

views

inversions duplications

updated 9 weeks ago by cmdcolin ★ 4.2k • written 9 weeks ago by priya.bmg ▴ 70

1

vote

6

replies

819

views

SV long-read short-read

9 weeks ago by priya.bmg ▴ 70

4

votes

9

replies

2.5k

views

Long-reads pbmm2 alignment

11 months ago by priya.bmg ▴ 70

0

votes

2

replies

597

views

whole-exome variant-calling

updated 14 months ago by Ram 45k • written 14 months ago by priya.bmg ▴ 70

0

votes

5

replies

1.2k

views

GATK gnomAD

updated 20 months ago by barslmn ★ 2.4k • written 20 months ago by priya.bmg ▴ 70

0

votes

0

replies

536

views

gzipped flow tensor Deepvariant records

2.1 years ago by priya.bmg ▴ 70

2

votes

2

replies

891

views

Sequencing

2.6 years ago by priya.bmg ▴ 70

0

votes

1

reply

830

views

vcf GATK-SV pandas annotation

updated 2.7 years ago by husensofteng ▴ 410 • written 2.7 years ago by priya.bmg ▴ 70

1

vote

5

replies

1.2k

views

CEMitool R

updated 2.0 years ago by Ram 45k • written 2.7 years ago by priya.bmg ▴ 70

1

vote

4

replies

1.1k

views

R WGCNA

updated 2.3 years ago by Ram 45k • written 2.7 years ago by priya.bmg ▴ 70

0

votes

0

replies

496

views

MAGMA gene-prioritization

updated 2.0 years ago by Ram 45k • written 2.7 years ago by priya.bmg ▴ 70

2

votes

4

replies

3.3k

views

PacBio

updated 2.3 years ago by Ram 45k • written 2.9 years ago by priya.bmg ▴ 70

0

votes

1

reply

1.3k

views

structural pbsv variants

updated 2.9 years ago by Maxine ▴ 50 • written 3.5 years ago by priya.bmg ▴ 70

0

votes

2

replies

1.0k

views

Long-read-sequencing Bacterial-contamination

updated 14 months ago by Ram 45k • written 3.0 years ago by priya.bmg ▴ 70

0

votes

0

replies

634

views

Methylation CIGAR PacBio

3.0 years ago by priya.bmg ▴ 70

1

vote

2

replies

1.1k

views

whole exome data

3.3 years ago by priya.bmg ▴ 70

3

votes

8

replies

2.7k

views

Oslo Lockfile conda concurrency

2.9 years ago by priya.bmg ▴ 70

0

votes

0

replies

749

views

Snakemake PacBio

3.4 years ago by priya.bmg ▴ 70

0

votes

1

reply

1.3k

views

filtering Rare variants

updated 3.5 years ago by Pierre Lindenbaum 166k • written 3.5 years ago by priya.bmg ▴ 70

1

vote

2

replies

1.4k

views

filtering variants GATK

updated 3.6 years ago by sbstevenlee ▴ 480 • written 3.6 years ago by priya.bmg ▴ 70

0

votes

1

reply

811

views

shared rare Hard-filtering variants

updated 3.6 years ago by Pierre Lindenbaum 166k • written 3.6 years ago by priya.bmg ▴ 70

0

votes

0

replies

641

views

calling Variant GATK Exome Concordance

3.6 years ago by priya.bmg ▴ 70

0

votes

1

reply

791

views

exome Filtering analysis variants

updated 3.6 years ago by brunobsouzaa ▴ 840 • written 3.6 years ago by priya.bmg ▴ 70

0

votes

1

reply

759

views

Analysis workflow-Germline GATK Variant

updated 3.8 years ago by ATpoint 88k • written 3.8 years ago by priya.bmg ▴ 70

0

votes

0

replies

886

views

picard GATK NGS

3.8 years ago by priya.bmg ▴ 70

0

votes

1

reply

904

views

Spark duplicates Mark

updated 3.8 years ago by benformatics 4.1k • written 3.8 years ago by priya.bmg ▴ 70

0

votes

9

replies

3.1k

views

bam samtools

updated 2.3 years ago by Ram 45k • written 3.8 years ago by priya.bmg ▴ 70

3

votes

7

replies

2.8k

views

Snakemake bwa

updated 2.5 years ago by Ram 45k • written 3.8 years ago by priya.bmg ▴ 70

1

vote

11

replies

3.4k

views

memory-issue Snakemake

updated 3.8 years ago by Hyper_Odin ▴ 320 • written 3.8 years ago by priya.bmg ▴ 70

2

votes

1

reply

865

views

base GATK NGS recalibration

updated 2.6 years ago by alexcouzens • 0 • written 3.8 years ago by priya.bmg ▴ 70

1

vote

1

reply

913

views

base GATK NGS recalibration

updated 3.8 years ago by brunobsouzaa ▴ 840 • written 3.8 years ago by priya.bmg ▴ 70

3

votes

7

replies

3.2k

views

BWA bwa-mem2

updated 3.9 years ago by Ishak ▴ 20 • written 3.9 years ago by priya.bmg ▴ 70

2

votes

11

replies

9.4k

views

alignment bwa-mem2

3.9 years ago by priya.bmg ▴ 70

1

vote

3

replies

2.1k

views

info read BWA group bwa-mem2

updated 3.9 years ago by GenoMax 152k • written 3.9 years ago by priya.bmg ▴ 70

1

vote

2

replies

1.3k

views

trimming adpater cutadapt

updated 3.9 years ago by gb ★ 2.2k • written 3.9 years ago by priya.bmg ▴ 70

4

votes

3

replies

1.9k

views

reference genome Decoy assembly Human

updated 3.9 years ago by Tm ★ 1.1k • written 3.9 years ago by priya.bmg ▴ 70

2

votes

5

replies

2.4k

views

base NGS recalibration preprocessing GATK

3.9 years ago by priya.bmg ▴ 70

2

votes

2

replies

1.5k

views

picard GATK NGS

3.9 years ago by priya.bmg ▴ 70

2

votes

12

replies

3.2k

views

Bowtie2 alignment

updated 3.9 years ago by GenoMax 152k • written 3.9 years ago by priya.bmg ▴ 70

1

vote

1

reply

739

views

random Boolen network Genetic regulatory network

updated 4.6 years ago by Jean-Karim Heriche 27k • written 4.6 years ago by priya.bmg ▴ 70

4

votes

7

replies

2.1k

views

GEO Gene expression R

4.7 years ago by priya.bmg ▴ 70

2

votes

4

replies

1.1k

views

Perturbation Simulations Expression time steps

updated 4.7 years ago by Joe 22k • written 4.7 years ago by priya.bmg ▴ 70

0

votes

0

replies

851

views

Conserved allelic variation

updated 6.5 years ago by GenoMax 152k • written 6.5 years ago by priya.bmg ▴ 70

0

votes

0

replies

1.0k

views

RNA-Seq

updated 6.9 years ago by WouterDeCoster 48k • written 6.9 years ago by priya.bmg ▴ 70