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Answer: Answer: Generating count matrix from Chromium Fixed RNA Profiling (FRP) data outside Cel
4 months ago by MohammadAlkadi ▴ 70
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538
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After merging batches, I got very segmented umap in scanpy
scanpy single-cell
4 months ago by MohammadAlkadi ▴ 70
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Answer: Answer: After merging batches, I got very segmented umap in scanpy
4 months ago by MohammadAlkadi ▴ 70
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How to do typing of VDJ regions for10x TCR kit?
TCRA Immunology TCR
updated 14 months ago by ▴ 60 • written 20 months ago by ▴ 70
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Answer: Answer: 10X genomics single cell
20 months ago by MohammadAlkadi ▴ 70
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Comment: Comment: How to do typing of VDJ regions for10x TCR kit?
20 months ago by MohammadAlkadi ▴ 70
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1.6k
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Answer: Answer: Why fasterq-dump --split-3 give me only one file for paired-end SRA accession?
22 months ago by MohammadAlkadi ▴ 70
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602
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Comment: Comment: blastn command line won't find genes in large database
2.2 years ago by MohammadAlkadi ▴ 70
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2
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602
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blastn command line won't find genes in large database
blast
2.2 years ago by MohammadAlkadi ▴ 70
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957
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Comment: Comment: How to get DEGs compare one sample to another?
2.4 years ago by MohammadAlkadi ▴ 70
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Comment: Comment: STAR aligner fatal error
2.9 years ago by MohammadAlkadi ▴ 70
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956
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Comment: Comment: Help! Master regulator prediction from DEGs in RNA-seq
2.9 years ago by MohammadAlkadi ▴ 70
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956
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Comment: Comment: Help! Master regulator prediction from DEGs in RNA-seq
2.9 years ago by MohammadAlkadi ▴ 70
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Answer: Answer: Combine full-length and 3` RNAseq, is it possible?
2.9 years ago by MohammadAlkadi ▴ 70
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Comment: Comment: RSEM Calculate Expression Error
2.9 years ago by MohammadAlkadi ▴ 70
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Answer: Answer: Warning message: 'channel' automatically added to varMetadata in phenoData.
2.9 years ago by MohammadAlkadi ▴ 70
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1.3k
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Answer: Answer: RSEM Calculate Expression Error
3.1 years ago by MohammadAlkadi ▴ 70
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Answer: A: How to trim Nanopore reads. Please suggest a tool.
3.1 years ago by MohammadAlkadi ▴ 70
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3.1k
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Answer: Answer: 3’UTR sequences for Saccharomyces Cerevisiae (yeast)
updated 16 months ago by 43k • written 4.4 years ago by ▴ 70
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1.1k
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Answer: A: The same location shares different GeneBank Accession in IGV and UCSC?
4.5 years ago by MohammadAlkadi ▴ 70
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3.5k
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Answer: A: Seurat sctransform return.only.var.genes = FALSE
4.5 years ago by MohammadAlkadi ▴ 70
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Comment: C: Nanopore SNP and indels calling tool
5.5 years ago by MohammadAlkadi ▴ 70
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3.1k
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Comment: C: tophat aligns to wrong strand
5.7 years ago by MohammadAlkadi ▴ 70
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1
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3.1k
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Comment: C: tophat aligns to wrong strand
5.7 years ago by MohammadAlkadi ▴ 70
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