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Comment: C: Working with VEP in anaconda
4.4 years ago by luzglongoria ▴ 50
3
votes
6
replies
1.2k
views
How to work with SNPs when low coverage
RNA-Seq SNP coverage
4.4 years ago by luzglongoria ▴ 50
6
votes
9
replies
5.8k
views
Working with VEP in anaconda
SNP anaconda conda vep RNA-Seq
updated 4.4 years ago by 23k • written 4.4 years ago by ▴ 50
0
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0
replies
1.5k
views
Comment: C: Segmentation fault Freebayes
4.4 years ago by luzglongoria ▴ 50
0
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1
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1.5k
views
Comment: C: Segmentation fault Freebayes
4.4 years ago by luzglongoria ▴ 50
0
votes
4
replies
1.5k
views
Segmentation fault Freebayes
freebayes SNP error segmentation
4.4 years ago by luzglongoria ▴ 50
2
votes
3
replies
3.8k
views
Problem with font size in a tree
tree interaction fontsize cophyloplot
updated 4.5 years ago by ▴ 20 • written 4.7 years ago by ▴ 50
0
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1
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1.0k
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Comment: C: running bwa in pair end reads
4.5 years ago by luzglongoria ▴ 50
1
vote
3
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1.0k
views
running bwa in pair end reads
RNA-Seq bwa sorted aligment
updated 4.5 years ago by 104k • written 4.5 years ago by ▴ 50
4
votes
4
replies
1.4k
views
How to get general information of an assembly
RNA-Seq assembly software
updated 5.0 years ago by ★ 2.4k • written 5.0 years ago by ▴ 50
0
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1
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1.4k
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Comment: C: How to get general information of an assembly
5.0 years ago by luzglongoria ▴ 50
0
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0
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5.0k
views
Comment: C: How to determine width of heatmap
5.0 years ago by luzglongoria ▴ 50
0
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0
replies
5.0k
views
Comment: C: How to determine width of heatmap
5.0 years ago by luzglongoria ▴ 50
0
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2
replies
5.0k
views
Comment: C: How to determine width of heatmap
5.0 years ago by luzglongoria ▴ 50
4
votes
9
replies
5.0k
views
How to determine width of heatmap
pheatmap label_row heatmap
updated 5.0 years ago by 5.8k • written 5.0 years ago by ▴ 50
0
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1
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16k
views
Comment: C: Error when running pheatmap
5.0 years ago by luzglongoria ▴ 50
0
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1
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16k
views
Comment: C: Error when running pheatmap
5.0 years ago by luzglongoria ▴ 50
0
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1
reply
16k
views
Comment: A: Error when running pheatmap
5.0 years ago by luzglongoria ▴ 50
3
votes
8
replies
16k
views
Error when running pheatmap
pheatmap Error in hclust
5.0 years ago by luzglongoria ▴ 50
0
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0
replies
16k
views
Comment: C: Error when running pheatmap
5.0 years ago by luzglongoria ▴ 50
3
votes
4
replies
963
views
statistical analyses for transcriptomes
RNA-Seq R Statistical analyses
updated 5.1 years ago by 81k • written 5.1 years ago by ▴ 50
0
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1
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963
views
Comment: C: statistical analyses for tanscriptomes
5.1 years ago by luzglongoria ▴ 50
0
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2
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59k
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Answer: A: Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to array exte
5.1 years ago by luzglongoria ▴ 50
5
votes
2
replies
4.0k
views
heatmap with ggplot: problem when indicating min and max value
ggplot heatmap scale_fill_gradient
updated 5.1 years ago by 8.9k • written 5.1 years ago by ▴ 50
0
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1
reply
3.6k
views
Comment: A: How to run Trinotate
5.1 years ago by luzglongoria ▴ 50
2
votes
4
replies
3.6k
views
How to run Trinotate
RNA-Seq trinotate assembly transcriptome
5.1 years ago by luzglongoria ▴ 50
0
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0
replies
3.6k
views
Comment: C: How to run Trinotate
5.1 years ago by luzglongoria ▴ 50
0
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0
replies
1.6k
views
Comment: C: Basic question about SWISSPROT
5.2 years ago by luzglongoria ▴ 50
0
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1
reply
1.6k
views
Comment: C: Basic question about SWISSPROT
5.2 years ago by luzglongoria ▴ 50
0
votes
1
reply
1.6k
views
Comment: C: Basic question about SWISSPROT
5.2 years ago by luzglongoria ▴ 50
1
vote
6
replies
1.6k
views
Basic question about SWISSPROT
SWISSPROT RNA-Seq transcriptome
5.2 years ago by luzglongoria ▴ 50
3
votes
1
reply
895
views
How to delete some contigs in an assembly
assembly RNA-Seq R
updated 5.2 years ago by 141k • written 5.2 years ago by ▴ 50
3
votes
5
replies
3.6k
views
How calculate CG content for each contig in an transcript assembly?
RNA-Seq assembly contig transcriptome CG content
updated 5.3 years ago by 5.8k • written 5.3 years ago by ▴ 50
0
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1
reply
3.6k
views
Comment: C: How calculate CG content for each contig in an transcript assembly?
5.3 years ago by luzglongoria ▴ 50
0
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1
reply
2.9k
views
Comment: C: Mapping with GMAP: which output option shall I use?
5.3 years ago by luzglongoria ▴ 50
0
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3
replies
2.9k
views
Mapping with GMAP: which output option shall I use?
genome transcriptome assembly
5.3 years ago by luzglongoria ▴ 50
5
votes
5
replies
2.7k
views
Mapping transcripts to genome
assembly gene RNA-Seq
updated 5.3 years ago by 8.2k • written 5.3 years ago by ▴ 50
0
votes
0
replies
4.5k
views
Comment: C: Calculate CG content in a fastq file
5.4 years ago by luzglongoria ▴ 50
0
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1
reply
4.5k
views
Comment: C: Calculate CG content in a fastq file
5.4 years ago by luzglongoria ▴ 50
2
votes
12
replies
4.5k
views
Calculate CG content in a fastq file
RNA-Seq bash
updated 5.4 years ago by 16k • written 5.4 years ago by ▴ 50
0
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1
reply
4.5k
views
Comment: C: Calculate CG content in a fastq file
5.4 years ago by luzglongoria ▴ 50
0
votes
1
reply
1.7k
views
Plots two phylogenetic trees face to face
ape phytools trees
5.4 years ago by luzglongoria ▴ 50
0
votes
2
replies
908
views
basic command in bash
RNA-Seq filter grep
5.4 years ago by luzglongoria ▴ 50
0
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0
replies
6.6k
views
Comment: C: ggplot2 problem with Date format
5.5 years ago by luzglongoria ▴ 50
0
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0
replies
6.6k
views
Comment: C: ggplot2 problem with Date format
5.5 years ago by luzglongoria ▴ 50
0
votes
6
replies
6.6k
views
ggplot2 problem with Date format
ggplot R lubridate datesinR
5.5 years ago by luzglongoria ▴ 50
0
votes
1
reply
2.6k
views
Comment: C: fastq file do not look as they should (running Hisat2)
5.6 years ago by luzglongoria ▴ 50
0
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0
replies
2.6k
views
Comment: C: fastq file do not look as they should (running Hisat2)
5.6 years ago by luzglongoria ▴ 50
2
votes
14
replies
2.6k
views
fastq file do not look as they should (running Hisat2)
hisat2 RNA-Seq fastq
5.6 years ago by luzglongoria ▴ 50
0
votes
1
reply
2.6k
views
Comment: A: fastq file do not look as they should (running Hisat2)
5.6 years ago by luzglongoria ▴ 50
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