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Comment: C: Working with VEP in anaconda
5.3 years ago by luzglongoria ▴ 50
3
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6
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1.5k
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How to work with SNPs when low coverage
RNA-Seq SNP coverage
5.3 years ago by luzglongoria ▴ 50
6
votes
9
replies
6.5k
views
Working with VEP in anaconda
SNP anaconda conda vep RNA-Seq
updated 5.3 years ago by 24k • written 5.3 years ago by ▴ 50
0
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0
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1.8k
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Comment: C: Segmentation fault Freebayes
5.3 years ago by luzglongoria ▴ 50
0
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1
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1.8k
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Comment: C: Segmentation fault Freebayes
5.3 years ago by luzglongoria ▴ 50
0
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4
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1.8k
views
Segmentation fault Freebayes
freebayes SNP error segmentation
5.3 years ago by luzglongoria ▴ 50
2
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3
replies
4.5k
views
Problem with font size in a tree
tree interaction fontsize cophyloplot
updated 5.4 years ago by ▴ 20 • written 5.6 years ago by ▴ 50
0
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1
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1.2k
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Comment: C: running bwa in pair end reads
5.4 years ago by luzglongoria ▴ 50
1
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3
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1.2k
views
running bwa in pair end reads
RNA-Seq bwa sorted aligment
updated 5.4 years ago by 105k • written 5.4 years ago by ▴ 50
4
votes
4
replies
1.7k
views
How to get general information of an assembly
RNA-Seq assembly software
updated 5.9 years ago by ★ 2.4k • written 5.9 years ago by ▴ 50
0
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1
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1.7k
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Comment: C: How to get general information of an assembly
5.9 years ago by luzglongoria ▴ 50
0
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0
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5.7k
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Comment: C: How to determine width of heatmap
6.0 years ago by luzglongoria ▴ 50
0
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0
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5.7k
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Comment: C: How to determine width of heatmap
6.0 years ago by luzglongoria ▴ 50
0
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2
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5.7k
views
Comment: C: How to determine width of heatmap
6.0 years ago by luzglongoria ▴ 50
4
votes
9
replies
5.7k
views
How to determine width of heatmap
pheatmap label_row heatmap
updated 6.0 years ago by 5.9k • written 6.0 years ago by ▴ 50
0
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1
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17k
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Comment: C: Error when running pheatmap
6.0 years ago by luzglongoria ▴ 50
0
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1
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17k
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Comment: C: Error when running pheatmap
6.0 years ago by luzglongoria ▴ 50
0
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1
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17k
views
Comment: A: Error when running pheatmap
6.0 years ago by luzglongoria ▴ 50
3
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8
replies
17k
views
Error when running pheatmap
pheatmap Error in hclust
6.0 years ago by luzglongoria ▴ 50
0
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0
replies
17k
views
Comment: C: Error when running pheatmap
6.0 years ago by luzglongoria ▴ 50
3
votes
4
replies
1.1k
views
statistical analyses for transcriptomes
RNA-Seq R Statistical analyses
updated 6.0 years ago by 87k • written 6.0 years ago by ▴ 50
0
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1
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1.1k
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Comment: C: statistical analyses for tanscriptomes
6.0 years ago by luzglongoria ▴ 50
0
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2
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65k
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Answer: A: Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to array exte
6.0 years ago by luzglongoria ▴ 50
5
votes
2
replies
4.5k
views
heatmap with ggplot: problem when indicating min and max value
ggplot heatmap scale_fill_gradient
updated 6.0 years ago by 9.0k • written 6.0 years ago by ▴ 50
0
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1
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4.1k
views
Comment: A: How to run Trinotate
6.1 years ago by luzglongoria ▴ 50
2
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4
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4.1k
views
How to run Trinotate
RNA-Seq trinotate assembly transcriptome
6.1 years ago by luzglongoria ▴ 50
0
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0
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4.1k
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Comment: C: How to run Trinotate
6.1 years ago by luzglongoria ▴ 50
0
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0
replies
1.9k
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Comment: C: Basic question about SWISSPROT
6.1 years ago by luzglongoria ▴ 50
0
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1
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1.9k
views
Comment: C: Basic question about SWISSPROT
6.1 years ago by luzglongoria ▴ 50
0
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1
reply
1.9k
views
Comment: C: Basic question about SWISSPROT
6.1 years ago by luzglongoria ▴ 50
1
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6
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1.9k
views
Basic question about SWISSPROT
SWISSPROT RNA-Seq transcriptome
6.1 years ago by luzglongoria ▴ 50
3
votes
1
reply
1.0k
views
How to delete some contigs in an assembly
assembly RNA-Seq R
updated 6.2 years ago by 150k • written 6.2 years ago by ▴ 50
3
votes
5
replies
4.2k
views
How calculate CG content for each contig in an transcript assembly?
RNA-Seq assembly contig transcriptome CG content
updated 6.2 years ago by 5.9k • written 6.2 years ago by ▴ 50
0
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1
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4.2k
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Comment: C: How calculate CG content for each contig in an transcript assembly?
6.2 years ago by luzglongoria ▴ 50
0
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1
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3.1k
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Comment: C: Mapping with GMAP: which output option shall I use?
6.2 years ago by luzglongoria ▴ 50
0
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3
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3.1k
views
Mapping with GMAP: which output option shall I use?
genome transcriptome assembly
6.2 years ago by luzglongoria ▴ 50
5
votes
5
replies
3.2k
views
Mapping transcripts to genome
assembly gene RNA-Seq
updated 6.2 years ago by 8.3k • written 6.2 years ago by ▴ 50
0
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0
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5.3k
views
Comment: C: Calculate CG content in a fastq file
6.3 years ago by luzglongoria ▴ 50
0
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1
reply
5.3k
views
Comment: C: Calculate CG content in a fastq file
6.3 years ago by luzglongoria ▴ 50
2
votes
12
replies
5.3k
views
Calculate CG content in a fastq file
RNA-Seq bash
updated 6.3 years ago by 16k • written 6.3 years ago by ▴ 50
0
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1
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5.3k
views
Comment: C: Calculate CG content in a fastq file
6.3 years ago by luzglongoria ▴ 50
0
votes
1
reply
1.9k
views
Plots two phylogenetic trees face to face
ape phytools trees
6.4 years ago by luzglongoria ▴ 50
0
votes
2
replies
1.1k
views
basic command in bash
RNA-Seq filter grep
6.4 years ago by luzglongoria ▴ 50
0
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0
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7.4k
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Comment: C: ggplot2 problem with Date format
6.4 years ago by luzglongoria ▴ 50
0
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0
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7.4k
views
Comment: C: ggplot2 problem with Date format
6.4 years ago by luzglongoria ▴ 50
0
votes
6
replies
7.4k
views
ggplot2 problem with Date format
ggplot R lubridate datesinR
6.4 years ago by luzglongoria ▴ 50
0
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1
reply
3.2k
views
Comment: C: fastq file do not look as they should (running Hisat2)
6.5 years ago by luzglongoria ▴ 50
0
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0
replies
3.2k
views
Comment: C: fastq file do not look as they should (running Hisat2)
6.5 years ago by luzglongoria ▴ 50
2
votes
14
replies
3.2k
views
fastq file do not look as they should (running Hisat2)
hisat2 RNA-Seq fastq
6.5 years ago by luzglongoria ▴ 50
0
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1
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3.2k
views
Comment: A: fastq file do not look as they should (running Hisat2)
6.5 years ago by luzglongoria ▴ 50
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