User: EduardoFox

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EduardoFox10
Reputation:
10
Status:
New User
Location:
IBCCF / UFRJ
Website:
https://www.researchga...
Twitter:
ofoxofox
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Google Scholar Page
Last seen:
1 month, 3 weeks ago
Joined:
2 months, 3 weeks ago
Email:
o*******@gmail.com

I am an entomologist, working on ants. I use R for data analysis, but I am no experienced bioinformatician. Quite limited programming skills. I try to do my best though.

 

Posts by EduardoFox

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Posting a large interactive table online, supplementary to a publication?
... I thought of Github Pages to host my tables, but apparently no shiny code works directly from there. In the example you provided, do you think it would be possible to have the app running directly from Gihub Pages? ...
written 8 weeks ago by EduardoFox10
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Comment: C: Posting a large interactive table online, supplementary to a publication?
... It is one very large table. The main interactive features are exactly filters and multi-paging to facilitate perusing the data. Like in the link, I think. Yes, I can provide the large table as well, but I believe very few readers do take the time to appreciate Supplementary data if it is not both at ...
written 8 weeks ago by EduardoFox10
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Comment: C: Posting a large interactive table online, supplementary to a publication?
... Perhaps I could, under ideal conditions. But as a postdoc in the 3rd world I think getting the department to set up a server for me will be quite hard. I will speak to my collaborators, nonetheless. ...
written 8 weeks ago by EduardoFox10
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Posting a large interactive table online, supplementary to a publication?
... I want to publish a transcriptome paper, along with interactive materials enabling readers to peruse the data behind the discussion. The R package 'plotly' enables rendering online-publishable tables that can be filtered & searched for specific entries. I would like to publish such a table as s ...
R publishing shiny rna-seq written 8 weeks ago by EduardoFox10
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Comment: C: Downloading full BlastKOALA results?
... Thanks for testing the download ! However you will see that the downloaded page is just what already shows in the screen, which I could easily get by selecting all and pasting to a text editor. I'd like to download the detailed results for *each queried protein* which you can only see by directly cl ...
written 12 weeks ago by EduardoFox10
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Downloading full BlastKOALA results?
... I have just started using BlastKOALA KEGG which has been useful in annotating (aminoacid) sequences. This is their website: https://www.kegg.jp/blastkoala/ When you get results, there are links for downloading. However these links will not download all detailed query search results, but just genera ...
wget annotation blast blastkoala ko written 12 weeks ago by EduardoFox10 • updated 12 weeks ago by lelle770

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