User: sagrikachugh

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Posts by sagrikachugh

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Comment: C: Heatmap for differential gene expression after cuffdiff
... @b.nota 1) I was told to run this pipeline by my professor while running this one I found that there are better one's available but didnt want to leave this in middle. 2) please elaborate what do you mean by multiple testing or what other parameters to be considered ? 3) I can use CummeRbund but my ...
written 21 months ago by sagrikachugh0
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Heatmap for differential gene expression after cuffdiff
... I am in a fix and want people out here to help me. I have a control and treatment both in replicates so total 12 samples (including replicates). I have run the tophat pipeline (PS: I know i shouldn't have gone for it and should have chosen HISAT or any better pipeline). So after cuffdiff i got a f ...
sequence R next-gen rna-seq written 21 months ago by sagrikachugh0

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