User: Mel161803

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Mel1618030
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Posts by Mel161803

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Answer: A: About ptt files from gbk files
... https://github.com/sgivan/gb2ptt/blob/master/README.md Just note that you should run the script as "perl gb2ptt.pl --infile filename.gbk" instead of what they said. ...
written 9 weeks ago by Mel1618030
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Answer: A: What Is A .Ptt File And How It Is Created?
... https://github.com/sgivan/gb2ptt/blob/master/README.md Just note that you should run the script as "perl gb2ptt.pl --infile filename.gbk" instead of what they said. ...
written 9 weeks ago by Mel1618030
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Better method to find specific enzymes in whole genome sequences?
... I need to check if the enzymes for certain metabolic pathways exist in different strains of my bacteria of interest. I have the complete genome sequence in fasta format, and also labelled by prokka. I found my gene of interest in a related bacteria in the Uniprot database, then I tried using BLAST ...
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Comment: A: What Is A .Ptt File And How It Is Created?
... I was just having this problem, and ended up using the perl script I got from here. [gb2ptt][1] Just note that you should run the script as "perl gb2ptt.pl --infile filename.gbk" instead of what they said. [1]: https://github.com/sgivan/gb2ptt/blob/master/README.md ...
written 5 months ago by Mel1618030

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